Zinc finger, BED-type containing 6 (ZBED6)

Restricted Expression:

leukemia [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

uncharacterized tissue; brain; placenta; liver; heart; mammary gland; embryonic tissue; lung; blood; muscle; kidney; ascites; lymph node

NCBI

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Finding cDNAs

UGID:3616183 UniGene Hs.716666 Homo sapiens (human) ZBED6

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Zinc finger, BED-type containing 6 (ZBED6)

Human protein-coding gene ZBED6. Represented by 26 ESTs from 16 cDNA libraries. EST representation biased toward leukemia. Corresponds to reference sequence NM_001174108.1. [UniGene 3616183 - Hs.716666]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001167579.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ZBED6 gene product	H. sapiens	100.0	978
NP_001160024.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Zbed6 gene product	M. musculus	91.1	979
Other hits (2 of 8) [Show all]		Species	Id(%)	Len(aa)
XP_002802039.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: zinc finger BED domain-containing protein 6-like	M. mulatta	98.3	892
XP_003434351.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: zinc finger BED domain-containing protein 6	C. lupus familiaris	94.3	980

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1q32.1
UniSTS entry:	Chr 1	RH99217
UniSTS entry:	Chr 1	SHGC-57057
UniSTS entry:	Chr 1	RH102476
UniSTS entry:	Chr 1	AL009827

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AF086224.1	Homo sapiens full length insert cDNA clone ZC66F06	P
	NM_001174108.1	Homo sapiens zinc finger, BED-type containing 6 (ZBED6), mRNA	P

EST sequences (10 of 26) [Show all sequences]

BX102952.1	Clone IMAGp998O21781_;_IMAGE:342380	heart		A
BX103912.1	Clone IMAGp998K12742_;_IMAGE:327299	heart		P
AI474861.1	Clone IMAGE:2160319	kidney	3' read	A
BX470522.1	Clone DKFZp686B12110	muscle	5' read	P
CN478993.1	Clone UI-CF-FN0-afu-n-16-0-UI	lung	3' read	PA
CN288177.1		embryonic tissue	5' read
AW997794.1		mammary gland
BE676268.1	Clone IMAGE:3295782	uncharacterized tissue	3' read	A
DA319394.1	Clone BRHIP3011598	brain	5' read
DB356396.1	Clone HEMBA1003340	embryonic tissue	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria