> Vpr (HIV-1) binding protein (VPRBP)
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UGID:3616140     UniGene Hs.716623     Homo sapiens (human)   VPRBP Order cDNA clone, Links
Vpr (HIV-1) binding protein (VPRBP)

Human protein-coding gene VPRBP. Represented by 226 ESTs from 133 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 3616140 - Hs.716623]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001169544.2 PREDICTED: protein VPRBP isoform 2 P. troglodytes 100.0 1506
NP_055518.1 VPRBP gene product H. sapiens 100.0 1506
XP_003894404.1 PREDICTED: protein VPRBP-like, partial P. anubis 100.0 658
XP_001915617.1 PREDICTED: protein VPRBP E. caballus 99.9 1506
XP_002802838.1 PREDICTED: protein VPRBP-like M. mulatta 99.8 1437
XP_003132288.3 PREDICTED: protein VPRBP S. scrofa 99.7 1410
XP_002713269.1 PREDICTED: HIV-1 Vpr binding protein O. cuniculus 99.6 1506
XP_003583858.1 PREDICTED: protein VPRBP B. taurus 99.5 1506
XP_002730008.1 PREDICTED: Vpr-binding protein isoform 1 R. norvegicus 99.5 1505
NP_001015507.1 Vprbp gene product M. musculus 99.4 1418
XP_002663314.2 PREDICTED: protein VPRBP-like D. rerio 85.3 347
NP_611592.2 mahjong, isoform A D. melanogaster 52.2 1085
NP_501725.2 Protein DCAF-1 C. elegans 48.0 171
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_004018477.1 PREDICTED: protein VPRBP isoform 1 O. aries 99.4 1506
XP_001368016.1 PREDICTED: protein VPRBP isoform 1 M. domestica 98.3 1502

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; uncharacterized tissue; ear; stomach; intestine; lymph node; eye; mammary gland; brain; thyroid; mixed; ovary; salivary gland; pancreas; skin; lung; kidney; prostate; embryonic tissue; uterus; connective tissue; blood; liver; heart; placenta; mouth; pituitary gland; amniotic fluid; bone; thymus; bladder; tonsil; ascites; muscle; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p21.2
UniSTS entry: Chr 3 SHGC-57673
UniSTS entry: Chr 3 D3S4443
UniSTS entry: Chr 3 RH93354
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AB018343.1 Homo sapiens mRNA for KIAA0800 protein, partial cds P
AL080145.1 Homo sapiens mRNA; cDNA DKFZp434P113 (from clone DKFZp434P113) PA
NM_014703.2 Homo sapiens Vpr (HIV-1) binding protein (VPRBP), transcript variant 1, mRNA PA
AK023239.1 Homo sapiens cDNA FLJ13177 fis, clone NT2RP3003870, highly similar to Homo sapiens Vpr-binding protein (VprBP), mRNA P
BC110371.1 Homo sapiens Vpr (HIV-1) binding protein, mRNA (cDNA clone MGC:102804 IMAGE:5547856), complete cds PA
AF061935.1 Homo sapiens HIV-1 Vpr-binding protein (VprBP) mRNA, partial cds P
BC022792.1 Homo sapiens Vpr (HIV-1) binding protein, mRNA (cDNA clone MGC:23092 IMAGE:4853730), complete cds PA
AF086402.1 Homo sapiens full length insert cDNA clone ZD75H11 A
NM_001171904.1 Homo sapiens Vpr (HIV-1) binding protein (VPRBP), transcript variant 2, mRNA PA

EST sequences (10 of 226) [Show all sequences]

AA976829.1 Clone IMAGE:1588324 uncharacterized tissue 3' read A
AI017757.1 Clone IMAGE:1639004 testis 3' read A
BX111553.1 Clone IMAGp998A191820_;_IMAGE:741018 ovary
CB163367.1 Clone L18POOL1n1-51-A08 liver 5' read
AI334649.1 Clone IMAGE:2054944 kidney 3' read A
AI337095.1 Clone IMAGE:2009561 uncharacterized tissue 3' read A
AI344301.1 Clone IMAGE:2062753 intestine 3' read
AI436353.1 Clone IMAGE:2126275 mixed 3' read A
AI307244.1 Clone IMAGE:2055247 kidney 3' read A
AI457226.1 Clone IMAGE:2149731 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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