> B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B)
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UGID:3321897     UniGene Hs.709690     Homo sapiens (human)   BCL11B Links
B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B)

Human protein-coding gene BCL11B. Represented by 78 ESTs from 44 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 3321897 - Hs.709690]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612808.1 BCL11B gene product H. sapiens 100.0 893
XP_001151763.2 PREDICTED: B-cell lymphoma/leukemia 11B isoform 1 P. troglodytes 99.9 893
XP_001103061.1 PREDICTED: b-cell lymphoma/leukemia 11B-like isoform 3 M. mulatta 99.8 893
NP_001162548.1 B-cell lymphoma/leukemia 11B P. anubis 99.7 893
NP_001073352.1 Bcl11b gene product M. musculus 92.8 883
NP_001083346.1 B-cell CLL/lymphoma 11A (zinc finger protein) X. laevis 60.3 706
NP_001035481.1 bcl11aa gene product D. rerio 60.3 828
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003356844.1 PREDICTED: B-cell lymphoma/leukemia 11B S. scrofa 98.1 888
XP_001251909.2 PREDICTED: B-cell lymphoma/leukemia 11B B. taurus 97.0 914

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; brain; muscle; lung; uncharacterized tissue; thymus; mouth; pancreas; bone marrow; embryonic tissue; mixed; bone; pharynx; heart; blood; connective tissue; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q32.2
UniSTS entry: Chr 14 REN47690
UniSTS entry: Chr 14 REN47691
UniSTS entry: Chr 14 REN47699
UniSTS entry: Chr 14 REN47696
UniSTS entry: Chr 14 REN47685
UniSTS entry: Chr 14 REN47692
UniSTS entry: Chr 14 REN47698
UniSTS entry: Chr 14 ECD17061
UniSTS entry: Chr 14 ECD20744
UniSTS entry: Chr 14 REN47686
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY752978.1 Homo sapiens truncated B-cell CLL/lymphoma 11B/T-cell receptor delta constant region fusion protein (BCL11B/TCRD fusion) mRNA, partial cds
AJ404614.1 Homo sapiens mRNA for B-cell lymphoma/leukaemia 11B (BCL11B gene) P
NM_022898.1 Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B), transcript variant 2, mRNA P
NM_138576.2 Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B), transcript variant 1, mRNA P
AF086271.1 Homo sapiens full length insert cDNA clone ZD44G02 A
AB057670.1 Homo sapiens ATL1-delta mRNA for ATL1-delta zinc finger protein, complete cds A
AB057668.1 Homo sapiens ATL1-beta mRNA for ATL1-beta zinc finger protein, complete cds A
AB057669.1 Homo sapiens ATL1-gamma mRNA for ATL1-gamma zinc finger protein, complete cds A
AB041218.1 Homo sapiens ATL1-alpha mRNA for ATL1-alpha zinc finger protein, complete cds A

EST sequences (10 of 78) [Show all sequences]

BX104143.1 Clone IMAGp998P03784_;_IMAGE:343538 heart A
AI453101.1 Clone IMAGE:2146009 mixed 3' read
R61554.1 Clone IMAGE:37914 brain 3' read A
R61607.1 Clone IMAGE:37914 brain 5' read
CD103963.1 Clone IMAGE:30371267 mixed 5' read
CD685973.1 pharynx
CD701737.1 pharynx
BP429964.1 Clone LEU2010_28_H3
AW382176.1 mouth
CK826588.1 Clone IMAGE: pancreas 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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