> Intraflagellar transport 20 homolog (Chlamydomonas) (IFT20)
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UGID:3123876     UniGene Hs.705431     Homo sapiens (human)   IFT20 Order cDNA clone, Links
Intraflagellar transport 20 homolog (Chlamydomonas) (IFT20)

Human protein-coding gene IFT20. Represented by 201 ESTs from 101 cDNA libraries. Corresponds to reference sequence NM_001267778.1. [UniGene 3123876 - Hs.705431]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003953143.1 PREDICTED: intraflagellar transport protein 20 homolog B P. troglodytes 100.0 157
NP_001254703.1 IFT20 gene product H. sapiens 100.0 157
NP_061342.1 Ift20 gene product M. musculus 97.7 131
NP_001001833.2 ift20 gene product D. rerio 85.6 131
NP_001082135.1 intraflagellar transport protein 20 homolog A X. laevis 85.6 131
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_003435353.1 PREDICTED: intraflagellar transport protein 20 homolog isoform 1 C. lupus familiaris 99.2 131
XP_001368523.1 PREDICTED: intraflagellar transport protein 20 homolog M. domestica 98.5 131

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; intestine; mammary gland; skin; blood; pharynx; mouth; adipose tissue; testis; placenta; lymph node; prostate; uncharacterized tissue; kidney; lung; mixed; trachea; thymus; muscle; heart; embryonic tissue; spleen; umbilical cord; pancreas; stomach; ovary; connective tissue; parathyroid; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q11.2
UniSTS entry: Chr 17 RH24980
UniSTS entry: Chr 17 SHGC-132058
UniSTS entry: Chr 17 D20S1105 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

AK309232.1 Homo sapiens cDNA, FLJ99273
NM_001267778.1 Homo sapiens intraflagellar transport 20 homolog (Chlamydomonas) (IFT20), transcript variant 6, mRNA A

EST sequences (10 of 201) [Show all sequences]

AA977219.1 Clone IMAGE:1587419 uncharacterized tissue 3' read
AI004339.1 Clone IMAGE:1624496 embryonic tissue 3' read A
AI004463.1 Clone IMAGE:1620800 testis 3' read A
AI037918.1 Clone IMAGE:1657729 embryonic tissue 3' read A
AA928316.1 Clone IMAGE:1553075 uncharacterized tissue 3' read A
AA947406.1 Clone IMAGE:1587989 uncharacterized tissue 3' read A
AI092333.1 Clone IMAGE:1692950 heart 3' read A
CB048502.1 Clone IMAGE:3270888 prostate 5' read
AI148293.1 Clone IMAGE:1697836 uterus 3' read A
AI247946.1 Clone IMAGE:1848973 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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