> ATP-binding cassette, sub-family D (ALD), member 3 (ABCD3)
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UGID:3080667     UniGene Hs.700576     Homo sapiens (human)   ABCD3 Order cDNA clone, Links
ATP-binding cassette, sub-family D (ALD), member 3 (ABCD3)

Human protein-coding gene ABCD3. Represented by 507 ESTs from 169 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 3080667 - Hs.700576]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002849.1 ABCD3 gene product H. sapiens 100.0 658
XP_513575.3 PREDICTED: ATP-binding cassette sub-family D member 3 P. troglodytes 100.0 402
XP_003892275.1 PREDICTED: ATP-binding cassette sub-family D member 3 isoform 1 P. anubis 99.5 658
NP_033017.2 Abcd3 gene product M. musculus 97.1 658
NP_001084980.1 ATP-binding cassette, sub-family D (ALD), member 3 X. laevis 92.8 652
NP_998647.1 abcd3a gene product D. rerio 89.6 655
NP_495408.1 Protein PMP-2 C. elegans 71.0 610
NP_608354.1 Pmp70, isoform A D. melanogaster 68.9 636
XP_957174.1 hypothetical protein NCU01751 N. crassa 53.5 273
NP_001190973.1 ABC transporter D family member 1 A. thaliana 49.9 892
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001491521.3 PREDICTED: ATP-binding cassette sub-family D member 3 E. caballus 98.8 585
XP_002808274.1 PREDICTED: LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like M. mulatta 98.7 677

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; trachea; thymus; lung; mouth; lymph node; liver; placenta; intestine; muscle; connective tissue; bone marrow; uterus; kidney; mixed; embryonic tissue; esophagus; skin; pancreas; spleen; bladder; mammary gland; pituitary gland; uncharacterized tissue; eye; prostate; pharynx; blood; lymph; adrenal gland; salivary gland; heart; ear; ascites; bone; ovary; vascular; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p21.3
UniSTS entry: Chr 1 D1S3571 [Map Viewer]
UniSTS entry: Chr 1 SHGC-75171 [Map Viewer]
UniSTS entry: Chr 1 ABCD3_1048
UniSTS entry: Chr 1 G29187
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BT006644.1 Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3 mRNA, complete cds P
BX648715.1 Homo sapiens mRNA; cDNA DKFZp686E02117 (from clone DKFZp686E02117) PA
AK126440.1 Homo sapiens cDNA FLJ44476 fis, clone UTERU2031611
NM_002858.3 Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3 (ABCD3), transcript variant 1, mRNA PA
BC068509.1 Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3, mRNA (cDNA clone MGC:87282 IMAGE:5265201), complete cds PA
M81182.1 Homo sapiens peroxisomal 70 kD membrane protein mRNA, complete cds PA
BC009712.2 Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3, mRNA (cDNA clone IMAGE:3895175), complete cds PA
AK308159.1 Homo sapiens cDNA, FLJ98107 P
NM_001122674.1 Homo sapiens ATP-binding cassette, sub-family D (ALD), member 3 (ABCD3), transcript variant 2, mRNA P
AK296791.1 Homo sapiens cDNA FLJ53353 complete cds, highly similar to ATP-binding cassette sub-family D member 3 P
AK302714.1 Homo sapiens cDNA FLJ54042 complete cds, highly similar to ATP-binding cassette sub-family D member 3 P
X58528.1 Human PMP70 mRNA for a peroxisomal membrane protein P

EST sequences (10 of 507) [Show all sequences]

AI057102.1 Clone IMAGE:1676201 embryonic tissue 3' read A
BX114587.1 Clone IMAGp998E14213_;_IMAGE:143221 placenta
AI222388.1 Clone IMAGE:1843195 mixed 3' read
AI249742.1 Clone IMAGE:1864269 kidney 3' read A
CB143554.1 Clone L16HLK3-21-H01 liver 5' read
CB161901.1 Clone L17N670205n1-41-F11 liver 5' read
CB159761.1 Clone L18POOL1n1-26-F08 liver 5' read
CB160218.1 Clone L18POOL1n1-52-B03 liver 5' read P
CB117194.1 Clone L4SNU368-29-D01 liver 5' read
CB136051.1 Clone L14ChoiCK0-3-C08 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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