> Transmembrane protein 55B (TMEM55B)
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UGID:132005     UniGene Hs.7001     Homo sapiens (human)   TMEM55B Order cDNA clone, Links
Transmembrane protein 55B (TMEM55B)

Human protein-coding gene TMEM55B. Represented by 289 ESTs from 136 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132005 - Hs.7001]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002805012.1 PREDICTED: transmembrane protein 55B-like isoform 1 M. mulatta 100.0 283
XP_003901539.1 PREDICTED: transmembrane protein 55B isoform 2 P. anubis 100.0 283
XP_520669.3 PREDICTED: transmembrane protein 55B-like isoform 2 P. troglodytes 100.0 283
NP_001094284.1 TMEM55B gene product H. sapiens 100.0 283
XP_001929264.1 PREDICTED: transmembrane protein 55B isoform 1 S. scrofa 100.0 283
NP_001069827.1 TMEM55B gene product B. taurus 100.0 276
NP_001028443.1 Tmem55b gene product M. musculus 98.6 283
NP_001088129.1 transmembrane protein 55B X. laevis 89.6 279
NP_001032453.1 zgc:123304 gene product D. rerio 82.2 268
NP_648372.1 CG6707, isoform A D. melanogaster 57.1 259
NP_497624.3 Protein Y71H2AM.2 C. elegans 52.0 175
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001505184.1 PREDICTED: transmembrane protein 55B-like isoform 2 E. caballus 99.3 283
XP_002718080.1 PREDICTED: transmembrane protein 55B isoform 1 O. cuniculus 99.3 283

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; embryonic tissue; mammary gland; mixed; muscle; nerve; thyroid; testis; cervix; pineal gland; spleen; ovary; lymph node; pituitary gland; skin; eye; adrenal gland; ascites; intestine; lung; blood; pancreas; placenta; uterus; mouth; stomach; thymus; heart; liver; lymph; prostate; bone; ganglia; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q11.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BX161490.1 human full-length cDNA clone CS0DJ006YG22 of T cells (Jurkat cell line) of Homo sapiens (human) P
BX248025.1 human full-length cDNA clone CS0DC014YA22 of Neuroblastoma of Homo sapiens (human) P
BC002867.1 Homo sapiens transmembrane protein 55B, mRNA (cDNA clone MGC:11248 IMAGE:3940519), complete cds PA
NM_001100814.1 Homo sapiens transmembrane protein 55B (TMEM55B), transcript variant 1, mRNA PA
BC020947.1 Homo sapiens transmembrane protein 55B, mRNA (cDNA clone MGC:26684 IMAGE:4816227), complete cds PA
AK314021.1 Homo sapiens cDNA, FLJ94679, highly similar to Homo sapiens transmembrane protein 55B (TMEM55B), mRNA P
NM_144568.2 Homo sapiens transmembrane protein 55B (TMEM55B), transcript variant 2, mRNA PA

EST sequences (10 of 289) [Show all sequences]

AI073505.1 Clone IMAGE:1565982 mixed 3' read A
AI092222.1 Clone IMAGE:1691139 heart 3' read A
AI092359.1 Clone IMAGE:1692963 heart 3' read A
AA910179.1 Clone IMAGE:1524494 mixed 3' read A
AI140562.1 Clone IMAGE:1653503 mixed 3' read A
AI143860.1 Clone IMAGE:1708723 heart 3' read A
CB068381.1 Clone IMAGE:6365355 pancreas 3' read A
BX103088.1 Clone IMAGp998F12671_;_IMAGE:299915 lung
CB111561.1 Clone L5HLK1-19-H12 liver 5' read
CB177283.1 Clone IMAGE:6365355 pancreas 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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