> Ferredoxin-fold anticodon binding domain containing 1 (FDXACB1)
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UGID:2977737     UniGene Hs.697132     Homo sapiens (human)   FDXACB1 Order cDNA clone, Links
Ferredoxin-fold anticodon binding domain containing 1 (FDXACB1)

Human protein-coding gene FDXACB1. Represented by 65 ESTs from 43 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2977737 - Hs.697132]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612387.1 FDXACB1 gene product H. sapiens 100.0 623
XP_508751.2 PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform 2 P. troglodytes 99.5 623
NP_941077.2 ferredoxin-fold anticodon-binding domain-containing protein 1 homolog M. musculus 75.6 621
NP_001093489.1 LOC566022 gene product D. rerio 61.6 266
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003910734.1 PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 P. anubis 95.5 623
XP_001106241.2 PREDICTED: alpha-1,2-mannosyltransferase ALG9 isoform 4 M. mulatta 95.2 231

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; lymph; mixed; eye; connective tissue; cervix; spleen; testis; uncharacterized tissue; pharynx; brain; lung; uterus; pancreas; vascular; stomach; mammary gland; skin; kidney; bone; lymph node; placenta
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23.1
UniSTS entry: Chr 11 D11S3407
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC107897.1 Homo sapiens cDNA clone IMAGE:30320140 A
BC006136.1 Homo sapiens ferredoxin-fold anticodon binding domain containing 1, mRNA (cDNA clone IMAGE:3677165), partial cds PA
BC127680.1 Homo sapiens ferredoxin-fold anticodon binding domain containing 1, mRNA (cDNA clone MGC:157767 IMAGE:40127680), complete cds P
BC127681.1 Homo sapiens cDNA clone IMAGE:40127681 P
NM_138378.2 Homo sapiens ferredoxin-fold anticodon binding domain containing 1 (FDXACB1), transcript variant 1, mRNA PA
AK311254.1 Homo sapiens cDNA, FLJ18296 P
AK097483.1 Homo sapiens cDNA FLJ40164 fis, clone TESTI2015914 P
AK300795.1 Homo sapiens cDNA FLJ54785 complete cds P
NR_038364.1 Homo sapiens ferredoxin-fold anticodon binding domain containing 1 (FDXACB1), transcript variant 2, non-coding RNA PA

EST sequences (10 of 65) [Show all sequences]

AI089039.1 Clone IMAGE:1670373 brain 3' read PA
AI276601.1 Clone IMAGE:1877818 mixed 3' read P
AI423775.1 Clone IMAGE:2103888 brain 3' read P
AI632899.1 Clone IMAGE:2273455 lung 3' read A
AI763192.1 Clone IMAGE:2398244 kidney 3' read PA
CB995897.1 Clone IMAGE:30333341 placenta 5' read P
CB963776.1 Clone IMAGE:30320140 vascular 5' read
CD696977.1 pharynx P
AW296845.1 Clone IMAGE:2728291 uncharacterized tissue 3' read A
AW386918.1 uncharacterized tissue


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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