Ubiquitin specific peptidase 50 (USP50)

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UGID:2747076 UniGene Hs.677758 Homo sapiens (human) USP50

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Ubiquitin specific peptidase 50 (USP50)

Human protein-coding gene USP50. Represented by 13 ESTs from 5 cDNA libraries. Corresponds to reference sequence NM_203494.4. [UniGene 2747076 - Hs.677758]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_987090.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	USP50 gene product	H. sapiens	100.0	333
NP_083439.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Usp50 gene product	M. musculus	80.8	369
Other hits (2 of 14) [Show all]		Species	Id(%)	Len(aa)
XP_003952700.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase 50	P. troglodytes	98.5	331
XP_001107612.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like	M. mulatta	92.5	372

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; mixed; uncharacterized tissue; blood

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	15
	Map position:	15q21.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AJ583818.2	Homo sapiens mRNA for ubiquitin specific proteinase 50 (USP50 gene)	P
	NM_203494.4	Homo sapiens ubiquitin specific peptidase 50 (USP50), mRNA	PA

EST sequences (13)

AI990110.1	Clone IMAGE:2498602	uncharacterized tissue	3' read	PA
AI990671.1	Clone IMAGE:2498794	uncharacterized tissue	3' read	P
DN831775.1	Clone MGC2.3.1.1.1.D04	mixed		P
DN831774.1	Clone MGC2.3.1.1.1.D04	mixed		P
DB448810.2	Clone H013038J17	testis	5' read	P
DB451236.2	Clone H013052J19	testis	5' read	P
DB451237.1	Clone H013052J20	testis	5' read	P
DB513975.2	Clone H013038J17	testis	3' read	PA
EB710312.1	Clone MGC2.3.1.1.1.D04	mixed		P
BG530055.1	Clone IMAGE:4696731	testis	5' read
BU657864.1	Clone cl29c02	blood	5' read	P
HY056303.1	Clone H04D199D23	testis		P
HY244521.1	Clone H04D199D23	testis		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria