ALX homeobox 3 (ALX3)

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UGID:2739271 UniGene Hs.669953 Homo sapiens (human) ALX3

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ALX homeobox 3 (ALX3)

Human protein-coding gene ALX3. Represented by 11 ESTs from 10 cDNA libraries. Corresponds to reference sequence NM_006492.2. [UniGene 2739271 - Hs.669953]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_006483.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ALX3 gene product	H. sapiens	100.0	342
XP_524801.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: ALX homeobox 3	P. troglodytes	99.7	342
NP_031467.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	homeobox protein aristaless-like 3	M. musculus	91.8	342
NP_001079116.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ALX homeobox protein 1	X. laevis	57.8	232
XP_695330.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: homeobox protein aristaless-like 3-like	D. rerio	53.5	281
Other hits (2 of 18) [Show all]		Species	Id(%)	Len(aa)
XP_003892401.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: homeobox protein aristaless-like 3	P. anubis	97.1	342
XP_001099295.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: ALX homeobox 3	M. mulatta	95.9	342

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uncharacterized tissue; brain; testis; kidney; intestine; embryonic tissue; ascites

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p13.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AF008203.1	Homo sapiens homeobox protein (Alx3) mRNA, complete cds	P
NM_006492.2	Homo sapiens ALX homeobox 3 (ALX3), mRNA	P
BC112007.1	Homo sapiens ALX homeobox 3, mRNA (cDNA clone MGC:138212 IMAGE:8327475), complete cds	P
BC113428.1	Homo sapiens ALX homeobox 3, mRNA (cDNA clone MGC:141988 IMAGE:8322480), complete cds	P

EST sequences (11)

CD622788.1		uncharacterized tissue
CD622789.1		uncharacterized tissue
CN278094.1		embryonic tissue	5' read
BP308162.1	Clone NRB04090	brain	5' read	P
DA715248.1	Clone NT2RI2022474		5' read
DB368723.1	Clone NT2RP3003047	testis	3' read
DB347423.1	Clone TKIDN2011946	kidney	3' read
DB340324.1	Clone TESTI4015681	testis	3' read
BF802353.1		intestine
BM853027.1	Clone S22SNU16n1-131-E03	ascites	5' read
AA134057.1	Clone IMAGE:587297	intestine	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria