> Stromal antigen 3-like 2 (STAG3L2)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2735956     UniGene Hs.666638     Homo sapiens (human)   STAG3L2 Order cDNA clone, Links
Stromal antigen 3-like 2 (STAG3L2)

Human pseudo gene STAG3L2. Represented by 105 ESTs from 69 cDNA libraries. Corresponds to reference sequence NR_040584.1. [UniGene 2735956 - Hs.666638]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003949264.1 PREDICTED: LOW QUALITY PROTEIN: STAG3-like protein 1-like P. troglodytes 96.4 166
NP_036579.2 STAG3 gene product H. sapiens 88.8 188
NP_058660.2 Stag3 gene product M. musculus 66.4 217
NP_001080997.1 cohesin subunit SA-2 X. laevis 52.1 163
NP_001093498.1 stromal antigen 2 D. rerio 51.5 167
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001102876.1 PREDICTED: cohesin subunit SA-3-like M. mulatta 88.8 188
XP_003895841.1 PREDICTED: cohesin subunit SA-3 isoform 3 P. anubis 87.8 188

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: cervix; pharynx; blood; testis; esophagus; brain; mixed; mouth; intestine; embryonic tissue; mammary gland; placenta; liver; thyroid; pancreas; eye; uterus; uncharacterized tissue; lung; kidney; ascites; spleen; larynx; bone marrow; ovary; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q11.23
UniSTS entry: Chr 7 A008Q20
UniSTS entry: Chr 7 GDB:4585025
UniSTS entry: Chr 7 RH46474 [Map Viewer]
UniSTS entry: Chr 7 Bdyc3h07 [Map Viewer]
UniSTS entry: Chr 7 D7S1490
UniSTS entry: Chr 7 RH16531 [Map Viewer]
UniSTS entry: Chr 7 D7S489 [Map Viewer]
UniSTS entry: Chr 7 D7S489 [Map Viewer]
UniSTS entry: Chr 17 D7S489_C
UniSTS entry: Chr 7 D7S489_B
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

BC119761.1 Homo sapiens stromal antigen 3-like 2, mRNA (cDNA clone MGC:149883 IMAGE:40119328), complete cds P
NR_040584.1 Homo sapiens stromal antigen 3-like 2 (STAG3L2), non-coding RNA PA

EST sequences (10 of 105) [Show all sequences]

AA999887.1 Clone IMAGE:1636425 kidney 3' read
AI016319.1 Clone IMAGE:1622871 embryonic tissue 3' read
AA905125.1 Clone IMAGE:1523368 mixed 3' read
AI247893.1 Clone IMAGE:1848904 mixed 3' read
AI440341.1 Clone IMAGE:2073209 uncharacterized tissue 3' read
AI696900.1 Clone IMAGE:2324463 pancreas 3' read A
AI744376.1 Clone IMAGE:2217906 ovary 3' read
AI860318.1 Clone IMAGE:2423653 lung 3' read
BX419688.2 Clone CS0DF019YL15 brain 5' read
AW084216.1 Clone IMAGE:2587983 esophagus 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help