Transmembrane protein 239 (TMEM239)

Restricted Expression:

testis [show more like this]

normal [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; mixed; brain

NCBI

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Finding cDNAs

UGID:2733498 UniGene Hs.664180 Homo sapiens (human) TMEM239

Order cDNA clone, Links

Transmembrane protein 239 (TMEM239)

Human protein-coding gene TMEM239. Represented by 18 ESTs from 8 cDNA libraries. EST representation biased toward testis; normal. Corresponds to reference sequence NM_001167670.1. [UniGene 2733498 - Hs.664180]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001161142.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	TMEM239 gene product	H. sapiens	100.0	151
NP_080029.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Tmem239 gene product	M. musculus	86.1	150
Other hits (2 of 11) [Show all]		Species	Id(%)	Len(aa)
XP_001114406.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: hypothetical protein LOC716832 isoform 3	M. mulatta	97.4	194
XP_003905041.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: transmembrane protein 239 isoform 2	P. anubis	96.9	194

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	20
	Map position:	20p13

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK126033.1	Homo sapiens cDNA FLJ44045 fis, clone TESTI4030159	PA
BC021178.2	Homo sapiens chromosome 20 open reading frame 141, mRNA (cDNA clone MGC:33216 IMAGE:5265299), complete cds	PA
NM_001167670.1	Homo sapiens transmembrane protein 239 (TMEM239), mRNA	P

EST sequences (10 of 18) [Show all sequences]

AI028564.1	Clone IMAGE:1645600	testis	3' read	P
BX095345.1	Clone IMAGp998L174175_;_IMAGE:1645600	testis		P
BX113059.1	Clone IMAGp998B032640_;_IMAGE:1055906	testis
AI216026.1	Clone IMAGE:1844279	mixed	3' read
AI383461.1	Clone IMAGE:2087474	mixed	3' read
AI828062.1	Clone IMAGE:2357490	mixed	3' read	PA
AW102657.1	Clone IMAGE:2602870	mixed	3' read	P
AW173227.1	Clone IMAGE:2663971	mixed	3' read	P
CV024591.1		mixed	5' read	P
DB337508.1	Clone TESTI2022722	testis	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria