Contactin associated protein-like 5 (CNTNAP5)

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UGID:2729971 UniGene Hs.660653 Homo sapiens (human) CNTNAP5

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Contactin associated protein-like 5 (CNTNAP5)

Human protein-coding gene CNTNAP5. Represented by 16 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_130773.2. [UniGene 2729971 - Hs.660653]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_570129.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CNTNAP5 gene product	H. sapiens	100.0	1305
NP_001070893.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	contactin-associated protein like 5-1 precursor	M. musculus	86.7	1303
XP_003199321.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: contactin-associated protein-like 4-like	D. rerio	57.5	1275
Other hits (2 of 20) [Show all]		Species	Id(%)	Len(aa)
XP_001086018.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: contactin-associated protein-like 5-like	M. mulatta	98.9	1305
XP_003909291.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: contactin-associated protein-like 5	P. anubis	98.9	1305

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; mixed; testis; eye; uncharacterized tissue; pineal gland

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	2
	Map position:	2q14.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK056528.1	Homo sapiens cDNA FLJ31966 fis, clone NT2RP7007925, weakly similar to Homo sapiens contactin associated protein (Caspr) mRNA	P
AB077881.1	Homo sapiens mRNA for caspr5, complete cds	P
NM_130773.2	Homo sapiens contactin associated protein-like 5 (CNTNAP5), mRNA	P

EST sequences (10 of 16) [Show all sequences]

AI199572.1	Clone IMAGE:1860555	brain	3' read
BX492462.1	Clone DKFZp781C131	uncharacterized tissue	5' read
AW136921.1	Clone IMAGE:2717593	mixed	3' read	A
AW896193.1		brain
DN993609.1	Clone TC110787	brain	5' read	P
DR003498.1	Clone TC120406	brain	5' read	P
DA294594.1	Clone BRHIP2007106	brain	5' read	P
DA488727.1	Clone FCBBF2007319	brain	5' read
DA743737.1	Clone NT2RP7007925	testis	5' read
DB324867.1	Clone NT2RP7007925	testis	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria