> Chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2)
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UGID:2726887     UniGene Hs.657569     Homo sapiens (human)   CSGALNACT2 Order cDNA clone, Links
Chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2)

Human protein-coding gene CSGALNACT2. Represented by 171 ESTs from 106 cDNA libraries. Corresponds to reference sequence NM_018590.4. [UniGene 2726887 - Hs.657569]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_507752.2 PREDICTED: chondroitin sulfate N-acetylgalactosaminyltransferase 2 P. troglodytes 100.0 541
NP_061060.3 CSGALNACT2 gene product H. sapiens 100.0 541
XP_003903613.1 PREDICTED: chondroitin sulfate N-acetylgalactosaminyltransferase 2 P. anubis 99.8 541
NP_084441.3 Csgalnact2 gene product M. musculus 94.5 541
NP_001119869.1 LOC560826 gene product D. rerio 78.9 536
NP_610567.1 CG12913 D. melanogaster 56.4 282
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
NP_001165641.1 chondroitin sulfate N-acetylgalactosaminyltransferase 2 M. mulatta 99.5 541
XP_001926452.2 PREDICTED: chondroitin sulfate N-acetylgalactosaminyltransferase 2 S. scrofa 98.9 541

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; lung; liver; eye; mixed; esophagus; uncharacterized tissue; testis; pancreas; blood; stomach; vascular; embryonic tissue; intestine; uterus; lymph node; kidney; pituitary gland; adrenal gland; mouth; placenta; trachea; thymus; connective tissue; skin; ganglia; ovary; heart; thyroid; bone marrow; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11.21
UniSTS entry: Chr 10 A008J24 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB090811.1 Homo sapiens ChGn-2 mRNA for chondroitin beta1,4 N-acetylgalactosaminyltransferase-2, complete cds P
AB079252.1 Homo sapiens mRNA for beta-1,4-N-acethylgalactosaminyltransferase, complete cds PA
BX647369.1 Homo sapiens mRNA; cDNA DKFZp313L158 (from clone DKFZp313L158) PA
BX640967.1 Homo sapiens mRNA; cDNA DKFZp686H05169 (from clone DKFZp686H05169) PA
BX641073.1 Homo sapiens mRNA; cDNA DKFZp686H13226 (from clone DKFZp686H13226) PA
AK125300.1 Homo sapiens cDNA FLJ43310 fis, clone NT2RI2008724, highly similar to Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2 (EC 2.4.1.174) P
NM_018590.4 Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2), mRNA PA
AK074474.1 Homo sapiens cDNA FLJ23894 fis, clone LNG14612 PA
BC030268.1 Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 2, mRNA (cDNA clone MGC:40204 IMAGE:5223190), complete cds PA
AF116646.1 Homo sapiens PRO0082 mRNA, complete cds PA
AF086458.1 Homo sapiens full length insert cDNA clone ZD84D09 PA

EST sequences (10 of 171) [Show all sequences]

BX094189.1 Clone IMAGp998N18794_;_IMAGE:347345 heart PA
BX102005.1 Clone IMAGp998F121156_;_IMAGE:486155 uterus
AI270631.1 Clone IMAGE:1978980 stomach 3' read A
AI282011.1 Clone IMAGE:1938429 embryonic tissue 3' read A
AI356844.1 Clone IMAGE:2012335 brain 3' read A
AI383651.1 Clone IMAGE:2067505 embryonic tissue 3' read A
AI583133.1 Clone IMAGE:2227094 pancreas 3' read A
AI652628.1 Clone IMAGE:2306327 uncharacterized tissue 3' read P
AI673813.1 Clone IMAGE:2183935 stomach 3' read A
AI674924.1 Clone IMAGE:2324322 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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