> Dachsous 2 (Drosophila) (DCHS2)
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UGID:2724982     UniGene Hs.655664     Homo sapiens (human)   DCHS2 Links
Dachsous 2 (Drosophila) (DCHS2)

Human protein-coding gene DCHS2. Represented by 32 ESTs from 23 cDNA libraries. EST representation biased toward ovarian tumor. Corresponds to 3 reference sequences (different isoforms). [UniGene 2724982 - Hs.655664]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060109.2 DCHS2 gene product H. sapiens 100.0 2915
XP_143371.6 PREDICTED: similar to cadherin protein M. musculus 72.0 2838
XP_001343759.4 PREDICTED: protocadherin-23-like D. rerio 46.6 2763
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001134749.1 PREDICTED: protocadherin-16 isoform 1 P. troglodytes 99.3 1363
XP_003899331.1 PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like P. anubis 94.8 2923

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: ovarian tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; ovary; testis; mammary gland; embryonic tissue; muscle; mixed; lung; trachea; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q31.3
UniSTS entry: Chr 4 G20355
UniSTS entry: Chr 4 A005N30 [Map Viewer]
UniSTS entry: Chr 4 D4S991
UniSTS entry: Chr 4 SHGC-59326 [Map Viewer]
UniSTS entry: Chr 4 D4S2555E [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

BX647835.1 Homo sapiens mRNA; cDNA DKFZp686D0823 (from clone DKFZp686D0823) PA
AK127704.1 Homo sapiens cDNA FLJ45804 fis, clone NT2RI3005923, weakly similar to Cadherin-related tumor suppressor precursor P
AK123368.1 Homo sapiens cDNA FLJ41374 fis, clone BRCAN2007426 P
AK000054.1 Homo sapiens cDNA FLJ20047 fis, clone COL00577 PA
AY354498.1 Homo sapiens protocadherin protein (PCDHJ) mRNA, partial cds P
AY354497.1 Homo sapiens cadherin protein (CDHJ) mRNA, complete cds P
NM_017639.3 Homo sapiens dachsous 2 (Drosophila) (DCHS2), transcript variant 1, mRNA PA
AK225200.1 Homo sapiens mRNA for dachsous 2 isoform 1 variant, clone: COL00577 PA
BC140919.1 Homo sapiens dachsous 2 (Drosophila), mRNA (cDNA clone IMAGE:9056731), complete cds P
AK095103.1 Homo sapiens cDNA FLJ37784 fis, clone BRHIP2028303, highly similar to Homo sapiens dachsous 2 (Drosophila) (DCHS2), transcript variant 1, mRNA P
AF169691.1 Homo sapiens cadherin-like protein VR8 mRNA, partial cds P
NM_001142553.1 Homo sapiens dachsous 2 (Drosophila) (DCHS2), transcript variant 3, mRNA P
NM_001142552.1 Homo sapiens dachsous 2 (Drosophila) (DCHS2), transcript variant 2, mRNA P

EST sequences (10 of 32) [Show all sequences]

AI184027.1 Clone IMAGE:1739146 lung 3' read
U69189.1 Clone 23123 brain P
AI286248.1 Clone IMAGE:1855353 mixed 3' read
AI493300.1 Clone IMAGE:2113611 mixed 3' read PA
CD171613.1 Clone IMAGE:30379061 testis 5' read P
BX506301.1 Clone DKFZp686D0823 muscle 5' read P
BX506302.1 Clone DKFZp686D0823 muscle 3' read PA
F06758.1 Clone c-1ka02 brain P
F12969.1 Clone c-3ha05 brain P
AW468939.1 Clone IMAGE:2911041 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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