Prefoldin subunit 5 (PFDN5)

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UGID:2724645 UniGene Hs.655327 Homo sapiens (human) PFDN5

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Prefoldin subunit 5 (PFDN5)

Human protein-coding gene PFDN5. Represented by 910 ESTs from 340 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2724645 - Hs.655327]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_081320.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Pfdn5 gene product	M. musculus	100.0	153
NP_001100264.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Pfdn5 gene product	R. norvegicus	100.0	153
XP_001104576.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5 isoform 2	M. mulatta	100.0	153
XP_003906506.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5	P. anubis	100.0	153
XP_509097.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5 isoform 2	P. troglodytes	100.0	153
NP_002615.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PFDN5 gene product	H. sapiens	100.0	153
XP_003365290.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5-like isoform 2	E. caballus	100.0	153
XP_001926233.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5-like isoform 1	S. scrofa	100.0	153
XP_002711060.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: prefoldin subunit 5	O. cuniculus	100.0	153
NP_001104665.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	pfdn5 gene product	D. rerio	88.2	151
NP_001088120.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	prefoldin subunit 5	X. laevis	86.8	151
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
NP_001238878.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PFDN5 gene product	C. lupus familiaris	99.3	153
NP_777157.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PFDN5 gene product	B. taurus	99.3	153

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; lung; mixed; uncharacterized tissue; liver; thyroid; prostate; testis; blood; heart; skin; muscle; intestine; connective tissue; tonsil; eye; uterus; placenta; bone marrow; spleen; kidney; bladder; larynx; pancreas; lymph node; ovary; vascular; thymus; mammary gland; bone; stomach; pituitary gland; pharynx; trachea; ascites; lymph; umbilical cord; parathyroid; cervix; adrenal gland; salivary gland; ear; nerve; adipose tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	12
Map position:	12q12
UniSTS entry:	Chr 12	SHGC-31943	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT007195.1	Homo sapiens prefoldin 5 mRNA, complete cds	P
NM_002624.3	Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 1, mRNA	PA
BC062671.1	Homo sapiens prefoldin subunit 5, mRNA (cDNA clone MGC:71907 IMAGE:6458093), complete cds	PA
BC003373.1	Homo sapiens prefoldin subunit 5, mRNA (cDNA clone IMAGE:2900793)	PA
AB055805.1	Homo sapiens mRNA for MM-1 gamma, complete cds	PA
AB055804.1	Homo sapiens mRNA for MM-1 beta, complete cds	PA
AB055803.1	Homo sapiens mRNA for MM-1 alpha, complete cds	P
AK292623.1	Homo sapiens cDNA FLJ76574 complete cds, highly similar to Homo sapiens prefoldin 5 (PFDN5), transcript variant 1, mRNA	PA
NM_145897.2	Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 3, mRNA	PA

EST sequences (10 of 910) [Show all sequences]

AA983982.1	Clone IMAGE:1601102	uncharacterized tissue	3' read	PA
AA988089.1	Clone IMAGE:1603890	lung	3' read	PA
AI002478.1	Clone IMAGE:1593590	kidney	3' read	PA
AI014731.1	Clone IMAGE:1598740	uncharacterized tissue	3' read	A
AI038420.1	Clone IMAGE:1647443	parathyroid	3' read	PA
AI052773.1	Clone IMAGE:1671998	uncharacterized tissue	3' read	PA
AI088185.1	Clone IMAGE:1683316	parathyroid	3' read	PA
AI092554.1	Clone IMAGE:1683444	parathyroid	3' read	PA
AI093062.1	Clone IMAGE:1694635	heart	3' read	PA
AI097465.1	Clone IMAGE:1707348	heart	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria