> Keratin 16 (KRT16)
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UGID:2724478     UniGene Hs.655160     Homo sapiens (human)   KRT16 Order cDNA clone, Links
Keratin 16 (KRT16)

Human protein-coding gene KRT16. Represented by 460 ESTs from 110 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_005557.3. [UniGene 2724478 - Hs.655160]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005548.2 KRT16 gene product H. sapiens 100.0 472
NP_001138310.1 keratin 16 P. troglodytes 99.8 468
NP_032496.1 Krt16 gene product M. musculus 88.8 464
NP_001086193.1 MGC84118 protein X. laevis 72.7 450
NP_998688.1 krt15 gene product D. rerio 64.0 450
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003913047.1 PREDICTED: keratin, type I cytoskeletal 16 P. anubis 99.0 475
XP_548101.2 PREDICTED: keratin, type I cytoskeletal 16 C. lupus familiaris 93.0 475

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; esophagus; mouth; larynx; intestine; brain; uncharacterized tissue; lung; cervix; mammary gland; bladder; pancreas; kidney; blood; pharynx; uterus; mixed; ovary; placenta; thyroid; thymus; prostate; adrenal gland; ascites; muscle; embryonic tissue; connective tissue; stomach; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.2
UniSTS entry: Chr 17 G16019
UniSTS entry: Chr 17 SHGC-12962
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AF061812.1 Homo sapiens keratin 16 (KRT16A) mRNA, complete cds P
NM_005557.3 Homo sapiens keratin 16 (KRT16), mRNA PA
AK290853.1 Homo sapiens cDNA FLJ75925 complete cds, highly similar to Homo sapiens keratin 16 (focal non-epidermolytic palmoplantar keratoderma) (KRT16), mRNA P
AK309296.1 Homo sapiens cDNA, FLJ99337 P
AK309278.1 Homo sapiens cDNA, FLJ99319 P
S72493.2 keratin=keratin 16 homolog [human, tracheobronchial epithelial cells, mRNA Partial, 976 nt] PA
BC039169.1 Homo sapiens keratin 16, mRNA (cDNA clone MGC:21296 IMAGE:4752995), complete cds PA
S79867.1 type I keratin 16 [human, epidermal keratinocytes, mRNA Partial, 1422 nt] P

EST sequences (10 of 460) [Show all sequences]

AA926877.1 Clone IMAGE:1486586 mouth 3' read
AA928454.1 Clone IMAGE:1486533 mouth 3' read
AI094055.1 Clone IMAGE:1688318 mixed 3' read PA
BX099800.1 Clone IMAGp998F181775_;_IMAGE:723857 ovary
AI168726.1 Clone IMAGE:1661280 mixed 3' read
AA928449.1 Clone IMAGE:1486526 mouth 3' read
AI283381.1 Clone IMAGE:1978606 esophagus 3' read PA
AI351028.1 Clone IMAGE:1934623 embryonic tissue 3' read A
AI367677.1 Clone IMAGE:1987389 uterus 3' read A
AI457740.1 Clone IMAGE:2144818 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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