> Multiple C2 domains, transmembrane 1 (MCTP1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2724405     UniGene Hs.655087     Homo sapiens (human)   MCTP1 Order cDNA clone, Links
Multiple C2 domains, transmembrane 1 (MCTP1)

Human protein-coding gene MCTP1. Represented by 110 ESTs from 74 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2724405 - Hs.655087]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_078993.4 MCTP1 gene product H. sapiens 100.0 998
XP_001091534.2 PREDICTED: multiple C2 and transmembrane domain-containing protein 1 isoform 1 M. mulatta 99.7 777
XP_001137353.3 PREDICTED: multiple C2 and transmembrane domain-containing protein 1 isoform 1 P. troglodytes 99.7 996
NP_084450.2 multiple C2 domains, transmembrane 1 M. musculus 97.1 693
XP_001921315.2 PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like D. rerio 81.8 669
NP_001036560.1 multiple C2 domain and transmembrane region protein, isoform B D. melanogaster 50.3 378
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_003899974.1 PREDICTED: multiple C2 and transmembrane domain-containing protein 1 isoform 3 P. anubis 99.3 996
XP_857016.1 PREDICTED: multiple C2 and transmembrane domain-containing protein 1 isoform 3 C. lupus familiaris 98.1 691

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; thymus; blood; pharynx; liver; mammary gland; ovary; kidney; connective tissue; mixed; intestine; stomach; testis; cervix; heart; lung; muscle; umbilical cord; uterus; spleen; trachea; bladder; skin; prostate; nerve; bone; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q15
UniSTS entry: Chr 5 A002B42
UniSTS entry: Chr 5 G19904
UniSTS entry: Chr 5 RH66318
UniSTS entry: Chr 5 WI-19978 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AY656716.1 Homo sapiens MCTP1S mRNA, complete cds P
AY656715.1 Homo sapiens MCTP1L mRNA, complete cds P
NM_001002796.2 Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant S, mRNA PA
AK025997.1 Homo sapiens cDNA: FLJ22344 fis, clone HRC06080 PA
NM_024717.4 Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant L, mRNA PA
AK058012.1 Homo sapiens cDNA FLJ25283 fis, clone STM06716 P
AK057694.1 Homo sapiens cDNA FLJ33132 fis, clone UMVEN2000133, weakly similar to RABPHILIN-3A P
AK055966.1 Homo sapiens cDNA FLJ31404 fis, clone NT2NE2000057
BC030005.2 Homo sapiens multiple C2 domains, transmembrane 1, mRNA (cDNA clone MGC:16292 IMAGE:3834212), complete cds PA
AK097929.1 Homo sapiens cDNA FLJ40610 fis, clone THYMU2012574
AK091330.1 Homo sapiens cDNA FLJ34011 fis, clone FCBBF2001868, weakly similar to RABPHILIN-3A P
AK297325.1 Homo sapiens cDNA FLJ54825 complete cds, highly similar to Mus musculus multiple C2 domains, transmembrane 1 (Mctp1), mRNA P

EST sequences (10 of 110) [Show all sequences]

AA928071.1 Clone IMAGE:1541637 mixed 3' read
CB069182.1 Clone IMAGE:6364689 pancreas 3' read
CB243358.1 Clone UI-CF-FN0-age-j-12-0-UI lung 3' read A
BX370527.2 Clone CS0DK010YC20 cervix 5' read
BX401207.2 Clone CS0DK010YC20 cervix 5' read P
CD640589.1 Clone IMAGE:30417786 blood 5' read P
BX505797.1 Clone DKFZp686B10212 muscle 5' read P
CD690767.1 pharynx
AW195317.1 Clone IMAGE:2699587 blood 3' read A
CD632270.1 uncharacterized tissue P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help