> Sodium channel and clathrin linker 1 (SCLT1)
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UGID:2724008     UniGene Hs.654690     Homo sapiens (human)   SCLT1 Links
Sodium channel and clathrin linker 1 (SCLT1)

Human protein-coding gene SCLT1. Represented by 88 ESTs from 58 cDNA libraries. Corresponds to reference sequence NM_144643.2. [UniGene 2724008 - Hs.654690]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_517437.2 PREDICTED: sodium channel and clathrin linker 1 P. troglodytes 100.0 687
NP_653244.2 SCLT1 gene product H. sapiens 100.0 687
NP_001074880.1 sodium channel and clathrin linker 1 M. musculus 82.1 687
XP_003197680.1 PREDICTED: sodium channel and clathrin linker 1 D. rerio 52.7 429
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001084189.1 PREDICTED: sodium channel and clathrin linker 1 M. mulatta 97.7 687
XP_003899231.1 PREDICTED: sodium channel and clathrin linker 1 P. anubis 97.4 687

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; blood; testis; bladder; liver; connective tissue; lung; prostate; uterus; vascular; embryonic tissue; brain; ovary; skin; placenta; kidney; pharynx; intestine; mixed; stomach; uncharacterized tissue; ear; eye; lymph; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q28.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK122852.1 Homo sapiens cDNA FLJ16472 fis, clone BRHIP3017637 P
BC064428.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:5762185), complete cds PA
BC121057.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:40118378), complete cds P
BC121058.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:40118380), complete cds P
BC128051.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:40118381), complete cds P
AK055217.1 Homo sapiens cDNA FLJ30655 fis, clone DFNES2000268, weakly similar to MYOSIN HEAVY CHAIN, STRIATED MUSCLE P
NM_144643.2 Homo sapiens sodium channel and clathrin linker 1 (SCLT1), mRNA P
AK093361.1 Homo sapiens cDNA FLJ36042 fis, clone TESTI2017537 P
BC014677.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:3862264), with apparent retained intron PA
BC040258.1 Homo sapiens sodium channel and clathrin linker 1, mRNA (cDNA clone IMAGE:5194636), with apparent retained intron PA

EST sequences (10 of 88) [Show all sequences]

AI768586.1 Clone IMAGE:2381607 kidney 3' read A
BX374867.2 Clone CS0DC004YO09 uncharacterized tissue 5' read
BX366769.2 Clone CS0DI049YJ15 placenta 5' read
BX509320.1 Clone DKFZp686F08283 muscle 5' read
CD679143.1 Clone hq05e12 eye 5' read
CD691962.1 pharynx
AW083303.1 Clone IMAGE:2583029 intestine 3' read
AW513286.1 Clone IMAGE:2707826 uterus 3' read A
AW770398.1 Clone IMAGE:3007527 kidney 3' read A
AW841206.1 intestine P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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