> Integrin, beta 7 (ITGB7)
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UGID:2723788     UniGene Hs.654470     Homo sapiens (human)   ITGB7 Order cDNA clone, Links
Integrin, beta 7 (ITGB7)

Human protein-coding gene ITGB7. Represented by 231 ESTs from 69 cDNA libraries. Corresponds to reference sequence NM_000889.1. [UniGene 2723788 - Hs.654470]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001141622.1 PREDICTED: integrin beta-7 isoform 4 P. troglodytes 100.0 797
NP_000880.1 ITGB7 gene product H. sapiens 100.0 797
NP_038594.2 Itgb7 gene product M. musculus 89.7 805
NP_001084331.1 integrin beta-1-B precursor X. laevis 54.2 764
NP_001030159.1 itgb1b gene product D. rerio 54.1 765
NP_524793.2 myospheroid D. melanogaster 51.5 299
NP_497787.1 Protein PAT-3 C. elegans 49.3 209
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_001087864.2 PREDICTED: integrin beta-7 M. mulatta 98.1 672
XP_003906497.1 PREDICTED: LOW QUALITY PROTEIN: integrin beta-7 P. anubis 97.9 771

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: spleen; uncharacterized tissue; thymus; blood; brain; stomach; pancreas; mammary gland; prostate; lymph node; kidney; embryonic tissue; mouth; intestine; connective tissue; testis; lung; bone marrow; trachea; cervix; pharynx; mixed; placenta; ascites; lymph; uterus; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.13
UniSTS entry: Chr 12 RK1228_1229 [Map Viewer]
UniSTS entry: Chr 12 D12S1937 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_000889.1 Homo sapiens integrin, beta 7 (ITGB7), mRNA PA
M68892.1 Human integrin beta-7 subunit mRNA, complete cds P
M62880.1 Human integrin beta-7 subunit mRNA, complete cds P
BC015916.1 Homo sapiens integrin, beta 7, mRNA (cDNA clone MGC:20174 IMAGE:4644086), complete cds PA
AK311703.1 Homo sapiens cDNA, FLJ18745 P
AK301523.1 Homo sapiens cDNA FLJ60922 complete cds, highly similar to Integrin beta-7 precursor P
AK300960.1 Homo sapiens cDNA FLJ56554 complete cds, highly similar to Integrin beta-7 precursor P
AK298239.1 Homo sapiens cDNA FLJ58402 complete cds, highly similar to Integrin beta-7 precursor PA
S80335.1 integrin beta 7 subunit [human, mRNA, 2798 nt] PA

EST sequences (10 of 231) [Show all sequences]

BX114422.1 Clone IMAGp998E055449_;_IMAGE:2204140 uterus A
AI380522.1 Clone IMAGE:2107532 uncharacterized tissue 3' read PA
AI479007.1 Clone IMAGE:2158034 uncharacterized tissue 3' read PA
AI738571.1 Clone IMAGE:2392065 intestine 3' read A
AI804573.1 Clone IMAGE:2204140 uterus 3' read PA
AI865190.1 Clone IMAGE:2411809 lymph node 3' read A
BX372468.2 Clone CS0DL012YC09 uncharacterized tissue 3' read P
BX385510.2 Clone CS0DL012YC09 uncharacterized tissue 5' read P
AI950684.1 Clone IMAGE:2547414 lung 3' read A
BX413979.2 Clone CS0DG004YC17 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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