> EF-hand calcium binding domain 12 (EFCAB12)
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UGID:2559320     UniGene Hs.652347     Homo sapiens (human)   EFCAB12 Order cDNA clone, Links
EF-hand calcium binding domain 12 (EFCAB12)

Human protein-coding gene EFCAB12. Represented by 50 ESTs from 32 cDNA libraries. Corresponds to reference sequence NM_207307.1. [UniGene 2559320 - Hs.652347]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_997190.1 EFCAB12 gene product H. sapiens 100.0 571
NP_001103976.1 Efcab12 gene product M. musculus 62.4 536
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_001143287.1 PREDICTED: EF-hand calcium-binding domain-containing protein 12 P. troglodytes 99.0 571
XP_001094977.1 PREDICTED: EF-hand domain-containing protein C3orf25 homolog isoform 2 M. mulatta 94.4 568

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; mammary gland; liver; embryonic tissue; pancreas; prostate; thymus; trachea; lung; eye; uterus; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21.3
UniSTS entry: Chr 1 D8S2282
UniSTS entry: Chr 1 D8S2279
UniSTS entry: Chr 1 D10S2448
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK127968.1 Homo sapiens cDNA FLJ46083 fis, clone TESTI2005564 P
BC066975.1 Homo sapiens chromosome 3 open reading frame 25, mRNA (cDNA clone MGC:87592 IMAGE:4374763), complete cds PA
NM_207307.1 Homo sapiens EF-hand calcium binding domain 12 (EFCAB12), mRNA PA
AL133011.1 Homo sapiens mRNA; cDNA DKFZp434P201 (from clone DKFZp434P201) PA
AK057281.1 Homo sapiens cDNA FLJ32719 fis, clone TESTI2000840 P
AK096099.1 Homo sapiens cDNA FLJ38780 fis, clone LIVER1000479 P
BC031104.1 Homo sapiens cDNA clone IMAGE:5287880, containing frame-shift errors PA

EST sequences (10 of 50) [Show all sequences]

AI560165.1 Clone IMAGE:2213121 uterus 3' read A
BX280155.1 Clone IMAGp998P1111450_;_IMAGE:5180794 mixed P
AI955723.1 Clone IMAGE:2509684 pancreas 3' read A
AW138740.1 Clone IMAGE:2716591 mixed 3' read A
CN358447.1 embryonic tissue 5' read P
CR749128.1 Clone IMAGp998E027399_;_IMAGE:2716393 mixed 5' read
BP396485.1 Clone hbt10306 pancreas 3' read A
DR000575.1 Clone TC100037 brain 5' read P
DA167692.1 Clone BRAMY2029224 brain 5' read P
DA319477.1 Clone BRHIP3011723 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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