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Ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8)
Human protein-coding gene RRP8. Represented by 256 ESTs from 126 cDNA libraries. Corresponds to reference sequence NM_015324.3. [UniGene 2559228 - Hs.652255]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
RRP8 gene product |
H. sapiens |
100.0 |
455 |
|
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PREDICTED: ribosomal RNA-processing protein 8 |
P. troglodytes |
99.8 |
455 |
|
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Rrp8 gene product |
M. musculus |
86.4 |
456 |
|
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PREDICTED: hypothetical protein LOC797198 |
D. rerio |
60.0 |
269 |
|
|
hypothetical protein CHLREDRAFT_98284 |
C. reinhardtii |
52.5 |
158 |
|
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ribosomal RNA-processing protein 8 |
A. thaliana |
51.8 |
219 |
|
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Protein T07A9.8 |
C. elegans |
45.9 |
194 |
| Other hits (2 of 45) [Show all] | Species | Id(%) | Len(aa) |
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PREDICTED: ribosomal RNA-processing protein 8-like |
M. mulatta |
96.5 |
455 |
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PREDICTED: ribosomal RNA-processing protein 8 |
P. anubis |
96.3 |
455 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
skin; uncharacterized tissue; placenta; lung; kidney; brain; uterus; ovary; intestine; blood; embryonic tissue; pharynx; mammary gland; larynx; tonsil; mixed; testis; prostate; cervix; pancreas; thyroid; spleen; liver; eye; lymph node; muscle; stomach; lymph; ascites; connective tissue; bone; adrenal gland; esophagus; nerve |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (5)
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BC001071.2 |
Homo sapiens ribosomal RNA processing 8, methyltransferase, homolog (yeast), mRNA (cDNA clone MGC:2638 IMAGE:3505288), complete cds |
PA |
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NM_015324.3 |
Homo sapiens ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8), mRNA |
PA |
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D87060.1 |
Homo sapiens hucep-1 mRNA for cerebral protein-1, complete cds |
P |
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AK091817.1 |
Homo sapiens cDNA FLJ34498 fis, clone HLUNG2005203 |
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AB007869.1 |
Homo sapiens KIAA0409 mRNA, partial cds |
P |
EST sequences (10 of 256) [Show all sequences]
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AI022004.1 |
Clone IMAGE:1655395 |
mixed |
3' read |
P |
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AI024386.1 |
Clone IMAGE:1640905 |
testis |
3' read |
A |
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AI038998.1 |
Clone IMAGE:1657291 |
embryonic tissue |
3' read |
P |
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CB047634.1 |
Clone IMAGE:3253173 |
kidney |
5' read |
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BX104526.1 |
Clone IMAGp998M191747_;_IMAGE:713274 |
lymph node |
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BX089762.1 |
Clone IMAGp998I024163_;_IMAGE:1640905 |
testis |
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P |
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AI197935.1 |
Clone IMAGE:1943671 |
prostate |
3' read |
A |
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AI202687.1 |
Clone IMAGE:1944400 |
prostate |
3' read |
A |
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AI282161.1 |
Clone IMAGE:1876007 |
mixed |
3' read |
PA |
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AI356016.1 |
Clone IMAGE:2016767 |
brain |
3' read |
A |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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