> Calponin 2 (CNN2)
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UGID:2499566     UniGene Hs.651512     Homo sapiens (human)   CNN2 Order cDNA clone, Links
Calponin 2 (CNN2)

Human protein-coding gene CNN2. Represented by 1187 ESTs from 326 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2499566 - Hs.651512]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004359.1 CNN2 gene product H. sapiens 100.0 308
NP_031751.1 Cnn2 gene product M. musculus 99.7 304
NP_001085881.1 MGC80982 protein X. laevis 89.4 282
NP_998514.1 cnn2 gene product D. rerio 83.8 303
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_001110773.1 PREDICTED: calponin-2-like isoform 3 M. mulatta 99.0 308
XP_003354007.1 PREDICTED: calponin-2 isoform 1 S. scrofa 98.7 308

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; blood; embryonic tissue; uncharacterized tissue; skin; lung; uterus; kidney; prostate; spleen; testis; placenta; intestine; adipose tissue; mammary gland; eye; liver; pancreas; connective tissue; stomach; cervix; vascular; adrenal gland; thymus; mixed; lymph node; bone marrow; tonsil; trachea; muscle; ovary; lymph; ascites; salivary gland; umbilical cord; bone; mouth; bladder; heart; esophagus; thyroid; larynx; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 19 RH70510
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 19 CNN2_8268
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AK126391.1 Homo sapiens cDNA FLJ44427 fis, clone UTERU2007724, highly similar to Homo sapiens calponin 2 (CNN2), transcript variant 2, mRNA P
NM_004368.2 Homo sapiens calponin 2 (CNN2), transcript variant 1, mRNA PA
NM_201277.1 Homo sapiens calponin 2 (CNN2), transcript variant 2, mRNA PA
CR541831.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0732D for gene CNN2, calponin 2; complete cds, without stopcodon P
CR541810.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0831D for gene CNN2, calponin 2; complete cds, incl. stopcodon P
AY927514.1 Homo sapiens mRNA sequence P
AY927510.1 Homo sapiens mRNA sequence
AK222924.1 Homo sapiens mRNA for calponin 2 isoform a variant, clone: HRC06034 P
AK024835.1 Homo sapiens cDNA: FLJ21182 fis, clone CAS11560, highly similar to D83735 Homo sapiens mRNA for neutral calponin PA
BC141833.1 Homo sapiens calponin 2, mRNA (cDNA clone MGC:165052 IMAGE:40148834), complete cds PA
BC141818.1 Homo sapiens calponin 2, mRNA (cDNA clone MGC:164915 IMAGE:40148129), complete cds PA
AK057960.1 Homo sapiens cDNA FLJ25231 fis, clone STM01762 P
BC148264.1 Homo sapiens calponin 2, mRNA (cDNA clone MGC:166950 IMAGE:8860204), complete cds P
AK293171.1 Homo sapiens cDNA FLJ52469 complete cds, highly similar to Calponin-2 P
AK300788.1 Homo sapiens cDNA FLJ52765 complete cds, highly similar to Calponin-2 P
AK297774.1 Homo sapiens cDNA FLJ52701 complete cds, highly similar to Calponin-2 P
AK295271.1 Homo sapiens cDNA FLJ52495 complete cds, highly similar to Calponin-2 P
D83735.1 Homo sapiens mRNA for neutral calponin, complete cds P
D86059.1 Homo sapiens mRNA for h2-calponin, partial cds P

EST sequences (10 of 1187) [Show all sequences]

AI039389.1 Clone IMAGE:1658806 embryonic tissue 3' read A
AI042575.1 Clone IMAGE:1665830 skin 3' read A
AI073343.1 Clone IMAGE:1632325 mammary gland 3' read A
BX116370.1 Clone IMAGp998M21114_;_IMAGE:121916 mixed P
CB145254.1 Clone L16HLK3-30-E07 liver 5' read P
CB161090.1 Clone L18POOL1n1-28-E07 liver 5' read
CB126451.1 Clone L5HLK1s1-18-G12 liver 5' read P
CB126287.1 Clone L5HLK1s1-31-G12 liver 5' read
CB155151.1 Clone B2N807043-8-E03 brain 5' read P
CB127272.1 Clone C1SNU17-3-F06 cervix 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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