| UGID:2499201 UniGene Hs.651147 Homo sapiens (human) AGAP5 |
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ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 (AGAP5)
Human protein-coding gene AGAP5. Represented by 24 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_001144000.1. [UniGene 2499201 - Hs.651147]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
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AGAP5 gene product |
H. sapiens |
100.0 |
685 |
|
|
Agap1 gene product |
M. musculus |
80.7 |
553 |
|
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arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 |
X. laevis |
71.4 |
609 |
|
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PREDICTED: centaurin, gamma 2-like |
D. rerio |
70.9 |
605 |
|
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centaurin gamma 1A, isoform C |
D. melanogaster |
54.0 |
263 |
|
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Protein CNT-2, isoform c |
C. elegans |
47.8 |
268 |
| Other hits (2 of 34) [Show all] | Species | Id(%) | Len(aa) |
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PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 isoform 1 |
P. troglodytes |
97.2 |
420 |
|
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PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like |
O. anatinus |
83.0 |
159 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
uncharacterized tissue; embryonic tissue; mammary gland; eye; mixed; larynx; heart; placenta; bladder; prostate; lung; lymph node; testis; connective tissue; pancreas; bone marrow |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (1)
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NM_001144000.1 |
Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 (AGAP5), mRNA |
P |
EST sequences (10 of 24) [Show all sequences]
|
CB052212.1 |
Clone IMAGE:3290197 |
uncharacterized tissue |
3' read |
PA |
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CB052213.1 |
Clone IMAGE:3290197 |
uncharacterized tissue |
5' read |
P |
|
AI952039.1 |
Clone IMAGE:2546683 |
lung |
3' read |
P |
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CN480362.1 |
Clone UI-H-EU0-azt-m-08-0-UI |
connective tissue |
3' read |
PA |
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CN351506.1 |
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embryonic tissue |
5' read |
P |
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BE006995.1 |
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mammary gland |
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BE780448.1 |
Clone IMAGE:3871849 |
eye |
5' read |
P |
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DR008109.1 |
Clone MGC5.1.1.1.1.E03 |
mixed |
|
P |
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CR989649.1 |
Clone RZPDp9016I1730 |
uncharacterized tissue |
5' read |
P |
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BF355312.1 |
|
larynx |
|
P |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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