> DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6)
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UGID:2478267     UniGene Hs.647643     Homo sapiens (human)   DNAJC6 Order cDNA clone, Links
DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6)

Human protein-coding gene DNAJC6. Represented by 364 ESTs from 105 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2478267 - Hs.647643]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001161657.1 PREDICTED: putative tyrosine-protein phosphatase auxilin isoform 4 P. troglodytes 100.0 969
NP_001243793.1 DNAJC6 gene product H. sapiens 100.0 969
XP_001090057.1 PREDICTED: putative tyrosine-protein phosphatase auxilin isoform 3 M. mulatta 99.9 969
NP_001158055.1 putative tyrosine-protein phosphatase auxilin isoform a M. musculus 96.7 967
XP_001336673.2 PREDICTED: putative tyrosine-protein phosphatase auxilin D. rerio 70.1 969
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_003892057.1 PREDICTED: LOW QUALITY PROTEIN: putative tyrosine-protein phosphatase auxilin P. anubis 98.5 1011
XP_001499396.2 PREDICTED: putative tyrosine-protein phosphatase auxilin-like E. caballus 97.8 900

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; muscle; pituitary gland; mixed; uncharacterized tissue; liver; bone marrow; lung; testis; intestine; lymph; spinal cord; heart; mammary gland; pancreas; eye; kidney; nerve; skin; embryonic tissue; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p31.3
UniSTS entry: Chr 1 D1S2423 [Map Viewer]
UniSTS entry: Chr 1 SHGC-74914 [Map Viewer]
UniSTS entry: Chr 1 SHGC-74940 [Map Viewer]
UniSTS entry: Chr 1 D1S2366 [Map Viewer]
UniSTS entry: Chr 1 SHGC-74946 [Map Viewer]
UniSTS entry: Chr 1 D1S1927E
UniSTS entry: Chr 1 DNAJC6__3749
UniSTS entry: Chr 1 SHGC-74951 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AB007942.1 Homo sapiens mRNA for KIAA0473 protein, partial cds P
BC051722.1 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6, mRNA (cDNA clone IMAGE:5262480), complete cds PA
BX647203.1 Homo sapiens mRNA; cDNA DKFZp686D1249 (from clone DKFZp686D1249) PA
NM_014787.3 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6), transcript variant 2, mRNA PA
BC109279.2 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6, mRNA (cDNA clone MGC:129914 IMAGE:40028812), complete cds P
BC109280.1 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6, mRNA (cDNA clone MGC:129915 IMAGE:40028814), complete cds P
AK296408.1 Homo sapiens cDNA FLJ53346 complete cds, highly similar to tyrosine-protein phosphatase auxilin (EC 3.1.3.48) P
NM_001256864.1 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6), transcript variant 1, mRNA PA
NM_001256865.1 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6), transcript variant 3, mRNA PA

EST sequences (10 of 364) [Show all sequences]

R18208.1 Clone IMAGE:30560 brain 5' read
AI023736.1 Clone IMAGE:1654981 mixed 3' read
AI051609.1 Clone IMAGE:1674158 mixed 3' read
AI124694.1 Clone IMAGE:1539979 brain 3' read
CB043978.1 Clone IMAGE:3217724 intestine 5' read P
BX091342.1 Clone IMAGp998P14603_;_IMAGE:274045 skin
AA904131.1 Clone IMAGE:1440391 ganglia 3' read
R36734.1 Clone IMAGE:31641 brain 5' read
R37867.1 Clone IMAGE:24126 brain 3' read A
R39322.1 Clone IMAGE:24172 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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