> NOP2/Sun domain family, member 5 (NSUN5)
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UGID:2477684     UniGene Hs.647060     Homo sapiens (human)   NSUN5 Order cDNA clone, Links
NOP2/Sun domain family, member 5 (NSUN5)

Human protein-coding gene NSUN5. Represented by 333 ESTs from 152 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 2477684 - Hs.647060]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001161819.1 NSUN5 gene product H. sapiens 100.0 469
XP_519138.3 PREDICTED: putative methyltransferase NSUN5 P. troglodytes 99.8 469
NP_663389.2 Nsun5 gene product M. musculus 92.0 464
NP_998450.1 nsun5 gene product D. rerio 66.0 427
XP_001698198.1 hypothetical protein CHLREDRAFT_41764 C. reinhardtii 51.6 220
NP_497088.3 Protein Y53F4B.4, isoform a C. elegans 47.3 222
NP_851079.1 NOL1/NOP2/sun family protein A. thaliana 45.8 212
Other hits (2 of 42) [Show all]SpeciesId(%)Len(aa)
XP_003895915.1 PREDICTED: putative methyltransferase NSUN5 P. anubis 98.7 469
XP_001110343.2 PREDICTED: putative methyltransferase NSUN5-like isoform 1 M. mulatta 98.5 469

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; skin; uncharacterized tissue; uterus; lymph; testis; embryonic tissue; mixed; stomach; esophagus; liver; mammary gland; spleen; ovary; placenta; thymus; prostate; nerve; muscle; intestine; blood; pancreas; connective tissue; salivary gland; trachea; mouth; eye; cervix; ascites; kidney; heart; vascular; lymph node; tonsil; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q11.23
UniSTS entry: Chr 7 RH10987 [Map Viewer]
UniSTS entry: Chr 7 RH104432
UniSTS entry: Chr 7 STS-W72988
UniSTS entry: Chr 7 WI-20883 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK126375.1 Homo sapiens cDNA FLJ44411 fis, clone UTERU1000024, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 5 (NSUN5), transcript variant 2, mRNA P
AK001129.1 Homo sapiens cDNA FLJ10267 fis, clone HEMBB1001056, weakly similar to PROLIFERATING-CELL NUCLEOLAR ANTIGEN P120 P
NM_018044.3 Homo sapiens NOP2/Sun domain family, member 5 (NSUN5), transcript variant 2, mRNA PA
BC008084.2 Homo sapiens NOL1/NOP2/Sun domain family, member 5, mRNA (cDNA clone MGC:986 IMAGE:2823604), complete cds PA
AF420249.1 Homo sapiens NOL1R mRNA, complete cds P
AK315361.1 Homo sapiens cDNA, FLJ96406, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 5 (NSUN5), transcript variant 1, mRNA P
AF412028.1 Homo sapiens Williams-Beuren syndrome critical region protein 20 copy A (WBSCR20A) mRNA, complete cds P
AK098619.1 Homo sapiens cDNA FLJ25753 fis, clone TST06204 P
AK298221.1 Homo sapiens cDNA FLJ58598 complete cds, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 5 (NSUN5), transcript variant 1, mRNA PA
NM_001168348.1 Homo sapiens NOP2/Sun domain family, member 5 (NSUN5), transcript variant 4, mRNA PA
NM_001168347.1 Homo sapiens NOP2/Sun domain family, member 5 (NSUN5), transcript variant 3, mRNA PA
NM_148956.2 Homo sapiens NOP2/Sun domain family, member 5 (NSUN5), transcript variant 1, mRNA PA

EST sequences (10 of 333) [Show all sequences]

AA994223.1 Clone IMAGE:1631166 mammary gland 3' read A
AI189756.1 Clone IMAGE:1725486 placenta 3' read A
AI193362.1 Clone IMAGE:1743031 lung 3' read A
AI214884.1 Clone IMAGE:1838240 testis 3' read A
AI262893.1 Clone IMAGE:1868296 kidney 3' read A
AI264882.1 Clone IMAGE:1938540 embryonic tissue 3' read A
CB128848.1 Clone L5HLK1-12-E07 liver 5' read P
CB138290.1 Clone L5HLK1-23-A06 liver 5' read P
CB154882.1 Clone B2N807043-30-A01 brain 5' read P
CB133036.1 Clone L12JSHC0s1-2-F01 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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