> Ribosomal protein L4 (RPL4)
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UGID:2360411     UniGene Hs.644628     Homo sapiens (human)   RPL4 Order cDNA clone, Links
Ribosomal protein L4 (RPL4)

Human protein-coding gene RPL4. Represented by 6892 ESTs from 661 cDNA libraries. Corresponds to reference sequence NM_000968.3. [UniGene 2360411 - Hs.644628]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001110778.1 PREDICTED: 60S ribosomal protein L4-like isoform 4 M. mulatta 100.0 426
XP_003901138.1 PREDICTED: 60S ribosomal protein L4 P. anubis 100.0 426
NP_000959.2 RPL4 gene product H. sapiens 100.0 426
NP_077174.1 Rpl4 gene product M. musculus 98.8 418
NP_001082721.1 60S ribosomal protein L4-B X. laevis 94.5 400
NP_998272.1 rpl4 gene product D. rerio 92.0 374
NP_524538.2 ribosomal protein L4 D. melanogaster 78.5 400
NP_010295.3 ribosomal 60S subunit protein L4B S. cerevisiae 72.2 360
XP_001694804.1 ribosomal protein L4, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 72.2 385
NP_001030663.1 60S ribosomal protein L4-1 A. thaliana 71.7 389
NP_491416.1 Protein RPL-4 C. elegans 69.9 344
XP_961104.1 60S ribosomal protein L4 N. crassa 68.4 360
Other hits (2 of 64) [Show all]SpeciesId(%)Len(aa)
XP_001519357.2 PREDICTED: 60S ribosomal protein L4-like, partial O. anatinus 99.5 190
NP_001014894.1 RPL4 gene product B. taurus 99.3 421

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; lung; eye; liver; uncharacterized tissue; intestine; cervix; skin; lymph; muscle; uterus; placenta; blood; prostate; testis; mammary gland; pancreas; kidney; stomach; ovary; mixed; vascular; ascites; tonsil; heart; pharynx; thymus; spleen; bone; esophagus; lymph node; connective tissue; pituitary gland; bone marrow; adrenal gland; thyroid; bladder; salivary gland; adipose tissue; mouth; umbilical cord; nerve; larynx; ganglia; ear; amniotic fluid; trachea; epididymis; parathyroid; spinal cord; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 15q22
UniSTS entry: Chr 15 RH65253
UniSTS entry: Chr 15 SHGC-18
UniSTS entry: Chr 15 RH65816 [Map Viewer]
UniSTS entry: Chr 15 RH68287
UniSTS entry: Chr 15 D14S106E
UniSTS entry: Chr 15 GDB:451670
UniSTS entry: Chr 4 D1S3696
UniSTS entry: Chr 19 A004Z42 [Map Viewer]
UniSTS entry: Chr 19 EST209638 [Map Viewer]
UniSTS entry: Chr 19 G59474
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AK130784.1 Homo sapiens cDNA FLJ27274 fis, clone TMS00767, highly similar to 60S ribosomal protein L4 P
NM_000968.3 Homo sapiens ribosomal protein L4 (RPL4), mRNA PA
BC066925.1 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:87190 IMAGE:5259747), complete cds PA
AB208977.1 Homo sapiens mRNA for ribosomal protein L4 variant protein P
AK223057.1 Homo sapiens mRNA for ribosomal protein L4 variant, clone: KAT00378 PA
BC095427.1 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:110964 IMAGE:30711782), complete cds PA
L20868.2 Homo sapiens ribosomal protein L4 (RPL4) mRNA, complete cds P
BC001365.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:2201 IMAGE:3051487), complete cds PA
BC002450.1 Homo sapiens cDNA clone IMAGE:3344612, **** WARNING: chimeric clone **** PA
BC005817.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:11073 IMAGE:3688641), complete cds PA
BC007996.1 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:15373 IMAGE:3546003), complete cds PA
BC007748.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:13282 IMAGE:4098568), complete cds PA
D23660.1 Homo sapiens mRNA for ribosomal protein, complete cds P
BC010151.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:19674 IMAGE:3353592), complete cds PA
BC009888.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:16528 IMAGE:4025800), complete cds PA
BC014653.1 Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:20247 IMAGE:4636179), complete cds PA
AK291859.1 Homo sapiens cDNA FLJ78454 complete cds, highly similar to Homo sapiens ribosomal protein L4 (RPL4), mRNA PA
AK291117.1 Homo sapiens cDNA FLJ78445 complete cds, highly similar to Homo sapiens ribosomal protein L4 (RPL4), mRNA PA
BC018840.2 Homo sapiens ribosomal protein L4, mRNA (cDNA clone IMAGE:3051153) PA
BC040610.1 Homo sapiens ribosomal protein L4, mRNA (cDNA clone IMAGE:3897039) PA

EST sequences (10 of 6892) [Show all sequences]

AA834522.1 Clone IMAGE:1421804 kidney P
AI080675.1 Clone IMAGE:1677316 mixed 3' read P
CA975856.1 Clone IMAGE:6202248 nerve 5' read P
CA976175.1 Clone IMAGE:6202598 nerve 5' read P
CB067754.1 Clone IMAGE: pancreas 5' read P
BX104667.1 Clone IMAGp998H15273_;_IMAGE:46419 brain P
AI174487.1 Clone IMAGE:1701324 kidney 3' read A
AI249903.1 Clone IMAGE:2000313 lymph node 3' read A
CB145336.1 Clone L16HLK3-19-H11 liver 5' read P
CB162696.1 Clone L17N670205n1-30-C02 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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