> Phosphofurin acidic cluster sorting protein 1 (PACS1)
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UGID:2225497     UniGene Hs.644326     Homo sapiens (human)   PACS1 Order cDNA clone, Links
Phosphofurin acidic cluster sorting protein 1 (PACS1)

Human protein-coding gene PACS1. Represented by 490 ESTs from 235 cDNA libraries. Corresponds to reference sequence NM_018026.3. [UniGene 2225497 - Hs.644326]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003909580.1 PREDICTED: phosphofurin acidic cluster sorting protein 1 P. anubis 100.0 962
XP_001170787.1 PREDICTED: phosphofurin acidic cluster sorting protein 1 isoform 4 P. troglodytes 100.0 962
NP_060496.2 PACS1 gene product H. sapiens 100.0 962
XP_001111390.2 PREDICTED: phosphofurin acidic cluster sorting protein 1-like M. mulatta 100.0 833
NP_694769.2 phosphofurin acidic cluster sorting protein 1 M. musculus 99.4 960
NP_001092218.1 pacs1a gene product D. rerio 76.5 894
NP_001124414.1 phosphofurin acidic cluster sorting protein 2 X. laevis 67.7 867
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
NP_599233.1 Pacs1 gene product R. norvegicus 99.4 960
XP_540837.3 PREDICTED: LOW QUALITY PROTEIN: phosphofurin acidic cluster sorting protein 1 C. lupus familiaris 99.0 961

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; prostate; placenta; intestine; liver; mammary gland; eye; blood; uncharacterized tissue; testis; nerve; thymus; kidney; pancreas; mixed; lung; mouth; bladder; embryonic tissue; ovary; lymph node; uterus; skin; connective tissue; heart; stomach; epididymis; tonsil; salivary gland; larynx; spleen; thyroid; trachea; cervix; ascites; bone; vascular; muscle; lymph; ganglia; umbilical cord; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.1-q13.2
UniSTS entry: Chr 11 RH18211 [Map Viewer]
UniSTS entry: Chr 11 A001T38 [Map Viewer]
UniSTS entry: RH12046
UniSTS entry: Chr 11 PACS1__5810
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC042909.1 Homo sapiens, Similar to cytosolic sorting protein PACS-1, clone IMAGE:5479132, mRNA PA
BC052577.1 Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone MGC:59915 IMAGE:4130626), complete cds PA
BC055288.1 Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone IMAGE:6501760), partial cds PA
AY320283.1 Homo sapiens endosome-TGN sorting connector mRNA, complete cds P
BC010096.1 Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone MGC:19685 IMAGE:3502170), complete cds PA
BC009936.1 Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone IMAGE:4134919), partial cds PA
BC003173.1 Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone IMAGE:2924227), partial cds PA
AB033001.1 Homo sapiens mRNA for KIAA1175 protein, partial cds P
AK001071.1 Homo sapiens cDNA FLJ10209 fis, clone HEMBA1006310, highly similar to Rattus norvegicus cytosolic sorting protein PACS-1a mRNA P
AL137271.1 Homo sapiens mRNA; cDNA DKFZp434H1014 (from clone DKFZp434H1014); partial cds A
NM_018026.3 Homo sapiens phosphofurin acidic cluster sorting protein 1 (PACS1), mRNA PA
AK293966.1 Homo sapiens cDNA FLJ58767 complete cds, highly similar to Phosphofurin acidic cluster sorting protein 1 P
AK056361.1 Homo sapiens cDNA FLJ31799 fis, clone NT2RI2009037, highly similar to Rattus norvegicus cytosolic sorting protein PACS-1a (PACS-1) mRNA P
AK096644.1 Homo sapiens cDNA FLJ39325 fis, clone OCBBF2015334, highly similar to Rattus norvegicus cytosolic sorting protein PACS-1a (PACS-1) mRNA P

EST sequences (10 of 490) [Show all sequences]

AI052087.1 Clone IMAGE:1652658 mixed 3' read A
AI127455.1 Clone IMAGE:1705939 heart 3' read A
R23421.1 Clone IMAGE:34360 brain 5' read
AI147048.1 Clone IMAGE:1693263 heart 3' read A
BX100356.1 Clone IMAGp998I042004_;_IMAGE:811851 mixed
AI168464.1 Clone IMAGE:1565789 mixed 3' read A
T06814.1 Clone HFBDZ22 brain
CB118899.1 Clone L13SNU387-2-A03 liver 5' read P
CB148546.1 Clone L15CKK1-42-B02 liver 5' read
AI204587.1 Clone IMAGE:1734900 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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