> Nuclear factor I/B (NFIB)
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UGID:2225266     UniGene Hs.644095     Homo sapiens (human)   NFIB Order cDNA clone, Links
Nuclear factor I/B (NFIB)

Human protein-coding gene NFIB. Represented by 393 ESTs from 183 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2225266 - Hs.644095]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001111171.1 PREDICTED: nuclear factor 1 B-type isoform 6 M. mulatta 100.0 493
XP_003911756.1 PREDICTED: nuclear factor 1 B-type isoform 4 P. anubis 100.0 493
NP_001177666.1 NFIB gene product H. sapiens 100.0 493
NP_001069572.1 NFIB gene product B. taurus 100.0 419
XP_001928092.3 PREDICTED: nuclear factor 1 B-type isoform 1 S. scrofa 99.8 560
XP_002708136.1 PREDICTED: nuclear factor I/B isoform 2 O. cuniculus 99.8 560
NP_113754.1 Nfib gene product R. norvegicus 99.8 493
XP_001147474.1 PREDICTED: uncharacterized protein LOC464995 isoform 6 P. troglodytes 99.8 493
XP_531936.2 PREDICTED: nuclear factor 1 B-type isoform 1 C. lupus familiaris 99.8 493
NP_001254808.1 NFIB gene product O. aries 99.7 344
NP_001106681.1 Nfib gene product M. musculus 99.6 560
XP_001493839.2 PREDICTED: nuclear factor 1 B-type-like E. caballus 99.6 493
NP_001089172.1 nuclear factor I/B X. laevis 96.5 484
NP_995592.2 nuclear factor I, isoform B D. melanogaster 77.1 201
NP_001073431.1 nfia gene product D. rerio 76.3 480
NP_001022506.1 Protein NFI-1, isoform b C. elegans 57.9 202
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_001507360.1 PREDICTED: nuclear factor 1 B-type-like isoform 1 O. anatinus 98.9 559
XP_001365923.1 PREDICTED: nuclear factor 1 B-type-like isoform 1 M. domestica 98.8 558

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; mixed; lung; mammary gland; thyroid; cervix; mouth; adipose tissue; umbilical cord; larynx; bladder; spleen; testis; trachea; kidney; liver; connective tissue; eye; heart; uncharacterized tissue; placenta; bone; skin; embryonic tissue; muscle; prostate; vascular; intestine; ear; ascites; ganglia; salivary gland; ovary; stomach; nerve; pituitary gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p24.1
UniSTS entry: Chr 9 D9S2012
UniSTS entry: Chr 9 RH80854
UniSTS entry: Chr 9 WI-14235 [Map Viewer]
UniSTS entry: Chr 9 MARC_17865-17866:1025013775:1
UniSTS entry: Chr 9 EST12E1
UniSTS entry: Chr 9 D9S1065E
UniSTS entry: Chr 9 RH78074
UniSTS entry: Chr 9 A006V16
UniSTS entry: Chr 9 A004O32 [Map Viewer]
UniSTS entry: Nfib
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

BT007266.1 Homo sapiens nuclear factor I/B mRNA, complete cds P
BX537707.1 Homo sapiens mRNA; cDNA DKFZp686F23223 (from clone DKFZp686F23223) A
BX537698.1 Homo sapiens mRNA; cDNA DKFZp686F09166 (from clone DKFZp686F09166) A
AL110126.1 Homo sapiens mRNA; cDNA DKFZp564H1916 (from clone DKFZp564H1916) A
BX648845.1 Homo sapiens mRNA; cDNA DKFZp686M02153 (from clone DKFZp686M02153) PA
BX648416.1 Homo sapiens mRNA; cDNA DKFZp686E13259 (from clone DKFZp686E13259) PA
AK129782.1 Homo sapiens cDNA FLJ26271 fis, clone DMC06179
NM_005596.3 Homo sapiens nuclear factor I/B (NFIB), transcript variant 3, mRNA P
AK131233.1 Homo sapiens cDNA FLJ16142 fis, clone BRAMY2035718, highly similar to NUCLEAR FACTOR 1-B P
AK021832.1 Homo sapiens cDNA FLJ11770 fis, clone HEMBA1005813
BC001283.1 Homo sapiens nuclear factor I/B, mRNA (cDNA clone MGC:5146 IMAGE:3462726), complete cds PA
AK290603.1 Homo sapiens cDNA FLJ76115 complete cds, highly similar to Homo sapiens nuclear factor I/B (NFIB), mRNA P
BC024316.1 Homo sapiens cDNA clone IMAGE:3912859, partial cds A
AK094066.1 Homo sapiens cDNA FLJ36747 fis, clone UTERU2016799
AK299605.1 Homo sapiens cDNA FLJ59242 complete cds, highly similar to Nuclear factor 1 B-type P
U07810.1 Human nuclear factor 1 B-type mRNA, partial cds P
NM_001190738.1 Homo sapiens nuclear factor I/B (NFIB), transcript variant 2, mRNA P
NM_001190737.1 Homo sapiens nuclear factor I/B (NFIB), transcript variant 1, mRNA P
U85193.1 Human nuclear factor I-B2 (NFIB2) mRNA, complete cds P
U70862.1 Human nuclear factor I B3 mRNA, complete cds PA
AF022215.1 Homo sapiens HMGIC/NFIB fusion protein (HMGIC/NFIB) mRNA, partial cds

EST sequences (10 of 393) [Show all sequences]

AA977525.1 Clone IMAGE:1555754 kidney 3' read A
AA910769.1 Clone IMAGE:1526666 mixed 3' read A
AI022136.1 Clone IMAGE:1652000 mixed 3' read P
AI091820.1 Clone IMAGE:1690941 mixed 3' read A
R22847.1 Clone IMAGE:35781 brain 5' read
R23042.1 Clone IMAGE:130995 placenta 5' read
AI129610.1 Clone IMAGE:1712506 uterus 3' read A
AI130934.1 Clone IMAGE:1709276 heart 3' read A
AI140312.1 Clone IMAGE:1688892 mixed 3' read A
AI143745.1 Clone IMAGE:1705947 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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