> Ubiquitin-fold modifier 1 (UFM1)
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UGID:2224826     UniGene Hs.643655     Homo sapiens (human)   UFM1 Order cDNA clone, Links
Ubiquitin-fold modifier 1 (UFM1)

Human protein-coding gene UFM1. Represented by 511 ESTs from 241 cDNA libraries. Corresponds to reference sequence NM_016617.2. [UniGene 2224826 - Hs.643655]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_080711.1 ubiquitin-fold modifier 1 precursor M. musculus 100.0 84
XP_001086251.1 PREDICTED: ubiquitin-fold modifier 1 M. mulatta 100.0 84
XP_003913839.1 PREDICTED: ubiquitin-fold modifier 1 P. anubis 100.0 84
XP_001149496.1 PREDICTED: uncharacterized protein LOC452546 isoform 5 P. troglodytes 100.0 84
NP_057701.1 UFM1 gene product H. sapiens 100.0 84
XP_534489.2 PREDICTED: ubiquitin-fold modifier 1 C. lupus familiaris 100.0 84
NP_001039779.1 UFM1 gene product B. taurus 100.0 84
XP_004012151.1 PREDICTED: ubiquitin-fold modifier 1 O. aries 100.0 84
XP_002721146.1 PREDICTED: ubiquitin-fold modifier 1 O. cuniculus 100.0 84
NP_997792.1 ufm1 gene product D. rerio 98.8 83
NP_001165187.1 ubiquitin-fold modifier 1 X. laevis 94.1 84
NP_498705.1 Protein TAG-277 C. elegans 89.2 93
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
NP_001119552.1 Ufm1 gene product R. norvegicus 98.8 84
XP_003341848.1 PREDICTED: ubiquitin-fold modifier 1-like M. domestica 98.8 84

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; liver; embryonic tissue; kidney; muscle; uncharacterized tissue; pharynx; testis; mixed; prostate; adipose tissue; ovary; pancreas; uterus; intestine; skin; lymph node; vascular; cervix; lung; blood; spleen; bladder; mouth; thymus; connective tissue; thyroid; stomach; salivary gland; lymph; pituitary gland; trachea; eye; bone marrow; ear; mammary gland; bone; heart; adrenal gland; ascites; parathyroid; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q13.3
UniSTS entry: Chr 17 STS-Z70222
UniSTS entry: Chr 13 NIB712 [Map Viewer]
UniSTS entry: Chr 13 RH26802
UniSTS entry: Chr 12 WI-15661 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB154404.1 Homo sapiens Ufm1 mRNA for Ubiquitin-fold modifier 1, complete cds P
CR457189.1 Homo sapiens full open reading frame cDNA clone RZPDo834C128D for gene BM-002, hypothetical protein BM-002; complete cds, incl. stopcodon P
NM_016617.2 Homo sapiens ubiquitin-fold modifier 1 (UFM1), mRNA P
BC005193.1 Homo sapiens ubiquitin-fold modifier 1, mRNA (cDNA clone MGC:12198 IMAGE:3829206), complete cds PA
AK307111.1 Homo sapiens cDNA, FLJ97059 A
AK309914.1 Homo sapiens cDNA, FLJ99955
AK095490.1 Homo sapiens cDNA FLJ38171 fis, clone FCBBF1000025, highly similar to Homo sapiens BM-002 mRNA P
AF369953.1 Homo sapiens BIGMo-38 mRNA, partial sequence
AF305827.2 Homo sapiens PRO3033 mRNA, complete cds
AF208844.1 Homo sapiens BM-002 mRNA, complete cds P
Z70222.1 H.sapiens mRNA for ORF (clone ICRFp507G2490)

EST sequences (10 of 511) [Show all sequences]

AA954779.1 Clone IMAGE:1560714 mixed 3' read
AA972561.1 Clone IMAGE:1584742 lung 3' read
AA976070.1 Clone IMAGE:1558428 lung 3' read
AA992943.1 Clone IMAGE:1625000 embryonic tissue 3' read
R17568.1 Clone IMAGE:32316 brain 5' read
AI018470.1 Clone IMAGE:1641997 testis 3' read
AI022486.1 Clone IMAGE:1650252 parathyroid 3' read A
AI041765.1 Clone IMAGE:1664548 skin 3' read
AI079860.1 Clone IMAGE:1678733 skin 3' read
R23945.1 Clone IMAGE:131423 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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