> Neuronal calcium sensor 1 (NCS1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2224152     UniGene Hs.642946     Homo sapiens (human)   NCS1 Order cDNA clone, Links
Neuronal calcium sensor 1 (NCS1)

Human protein-coding gene NCS1. Represented by 375 ESTs from 159 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2224152 - Hs.642946]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_062655.1 Ncs1 gene product M. musculus 100.0 189
NP_077342.1 Ncs1 gene product R. norvegicus 100.0 189
XP_001364484.1 PREDICTED: neuronal calcium sensor 1-like isoform 1 M. domestica 100.0 189
NP_001232084.1 LOC100189965 gene product T. guttata 100.0 189
NP_988973.1 ncs1 gene product X. tropicalis 100.0 189
NP_990708.1 NCS1 gene product G. gallus 100.0 189
XP_003428421.1 PREDICTED: neuronal calcium sensor 1-like O. anatinus 100.0 189
XP_003911236.1 PREDICTED: neuronal calcium sensor 1 P. anubis 100.0 189
NP_055101.2 NCS1 gene product H. sapiens 100.0 189
XP_003122289.2 PREDICTED: neuronal calcium sensor 1-like S. scrofa 100.0 189
XP_001165499.2 PREDICTED: neuronal calcium sensor 1-like isoform 2 P. troglodytes 100.0 187
XP_548415.3 PREDICTED: neuronal calcium sensor 1 C. lupus familiaris 100.0 168
XP_003211318.1 PREDICTED: neuronal calcium sensor 1-like, partial M. gallopavo 100.0 159
NP_001084088.1 neuronal calcium sensor 1 X. laevis 99.5 189
NP_001018350.1 ncs1b gene product D. rerio 98.4 189
NP_508186.1 Protein NCS-1 C. elegans 79.9 189
NP_573271.1 frequenin 1, isoform B D. melanogaster 75.4 186
XP_957456.1 neuronal calcium sensor 1 N. crassa 69.0 189
NP_010661.3 Frq1p S. cerevisiae 63.2 189
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
NP_001035637.1 NCS1 gene product B. taurus 99.5 189
XP_001118646.2 PREDICTED: neuronal calcium sensor 1-like M. mulatta 99.0 189

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; uncharacterized tissue; kidney; intestine; mammary gland; lung; skin; uterus; ovary; mixed; stomach; embryonic tissue; pancreas; mouth; prostate; heart; nerve; vascular; amniotic fluid; connective tissue; cervix; testis; thyroid; bladder; trachea; ascites; liver; blood; ganglia; adipose tissue; bone; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34
UniSTS entry: Chr 9 A001U14
UniSTS entry: Chr 9 RH93523
UniSTS entry: Chr 9 2006
UniSTS entry: AI836659
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AF134479.1 Homo sapiens neuronal calcium sensor mRNA, complete cds PA
AL161981.1 Homo sapiens mRNA; cDNA DKFZp761L1223 (from clone DKFZp761L1223) A
NM_014286.3 Homo sapiens neuronal calcium sensor 1 (NCS1), transcript variant 1, mRNA PA
AF186409.1 Homo sapiens frequenin mRNA, complete cds P
AK023889.1 Homo sapiens cDNA FLJ13827 fis, clone THYRO1000596
AK024709.1 Homo sapiens cDNA: FLJ21056 fis, clone CAS00684 A
X84048.1 H.sapiens mRNA for frequenin-like ubiquitous protein P
BC004856.2 Homo sapiens frequenin homolog (Drosophila), mRNA (cDNA clone MGC:10261 IMAGE:3928335), complete cds PA
BC008698.1 Homo sapiens, clone IMAGE:2822393, mRNA A
NM_001128826.1 Homo sapiens neuronal calcium sensor 1 (NCS1), transcript variant 2, mRNA PA

EST sequences (10 of 375) [Show all sequences]

AA984178.1 Clone IMAGE:1616517 brain 3' read
AA984214.1 Clone IMAGE:1629634 brain 3' read
AA984218.1 Clone IMAGE:1629644 brain 3' read A
AA984827.1 Clone IMAGE:1630689 brain 3' read
T05868.1 Clone HFBDH68 brain
R19804.1 Clone IMAGE:34756 brain 5' read
AI056322.1 Clone IMAGE:1669001 brain 3' read A
AI079596.1 Clone IMAGE:1663669 skin 3' read A
AI088543.1 Clone IMAGE:1696025 uterus 3' read
R21455.1 Clone IMAGE:31344 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help