> Propionyl CoA carboxylase, beta polypeptide (PCCB)
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UGID:139028     UniGene Hs.63788     Homo sapiens (human)   PCCB Order cDNA clone, Links
Propionyl CoA carboxylase, beta polypeptide (PCCB)

Human protein-coding gene PCCB. Represented by 534 ESTs from 253 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 139028 - Hs.63788]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003310094.1 PREDICTED: propionyl-CoA carboxylase beta chain, mitochondrial isoform 2 P. troglodytes 100.0 558
NP_001171485.1 PCCB gene product H. sapiens 100.0 558
XP_003895124.1 PREDICTED: propionyl-CoA carboxylase beta chain, mitochondrial isoform 2 P. anubis 99.7 567
XP_001114968.2 PREDICTED: propionyl-CoA carboxylase beta chain, mitochondrial isoform 3 M. mulatta 99.6 558
NP_080111.1 propionyl-CoA carboxylase beta chain, mitochondrial precursor M. musculus 97.2 540
NP_998090.1 pccb gene product D. rerio 92.8 538
NP_001083656.1 propionyl CoA carboxylase, beta polypeptide X. laevis 91.7 540
NP_741742.1 Protein PCCB-1, isoform b C. elegans 85.0 514
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
NP_001033637.1 PCCB gene product B. taurus 99.3 538
XP_004003365.1 PREDICTED: propionyl-CoA carboxylase beta chain, mitochondrial O. aries 98.9 538

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; mixed; liver; embryonic tissue; placenta; intestine; kidney; pituitary gland; cervix; umbilical cord; thyroid; esophagus; uterus; prostate; bladder; adrenal gland; skin; heart; lung; mammary gland; ascites; eye; connective tissue; ovary; pancreas; trachea; blood; pineal gland; bone; stomach; bone marrow; muscle; lymph node; thymus; larynx; spleen; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21-q22
UniSTS entry: Chr 3 MARC_10213-10214:997278182:1
UniSTS entry: GDB:375677
UniSTS entry: GDB:375685
UniSTS entry: GDB:375688
UniSTS entry: GDB:375691
UniSTS entry: Pccb
UniSTS entry: Chr 3 RH94340
UniSTS entry: Chr 3 SHGC-54603
UniSTS entry: Chr 3 RH103203
UniSTS entry: Chr 3 A009F46 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BC053661.1 Homo sapiens propionyl Coenzyme A carboxylase, beta polypeptide, mRNA (cDNA clone MGC:61502 IMAGE:6054692), complete cds PA
AK130359.1 Homo sapiens cDNA FLJ26849 fis, clone PRS07953, highly similar to Propionyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.3) P
NM_000532.4 Homo sapiens propionyl CoA carboxylase, beta polypeptide (PCCB), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
AB209009.1 Homo sapiens mRNA for Propionyl Coenzyme A carboxylase, beta polypeptide variant protein P
X73424.1 Homo sapiens gene for propionyl-CoA carboxylase a subunit P
AK225733.1 Homo sapiens mRNA for propionyl Coenzyme A carboxylase, beta polypeptide variant, clone: TST01956 PA
AK225215.1 Homo sapiens mRNA for propionyl Coenzyme A carboxylase, beta polypeptide variant, clone: COL09126 PA
BC013768.1 Homo sapiens propionyl Coenzyme A carboxylase, beta polypeptide, mRNA (cDNA clone MGC:9104 IMAGE:3919091), complete cds PA
BC018013.1 Homo sapiens, clone IMAGE:4284020, mRNA, partial cds PA
AL831978.2 Homo sapiens mRNA; cDNA DKFZp451E113 (from clone DKFZp451E113) PA
BC005909.1 Homo sapiens propionyl Coenzyme A carboxylase, beta polypeptide, mRNA (cDNA clone IMAGE:4133623) A
AF251191.1 Homo sapiens periodontal ligament cell-specific protein (PDLCS4) gene, partial sequence
AF251189.1 Homo sapiens periodontal ligament cell specific protein 1 mRNA, partial sequence
M13573.1 Human propionyl-CoA carboxylase beta chain mRNA P
AK303079.1 Homo sapiens cDNA FLJ53115 complete cds, highly similar to Propionyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.3) P
AK302522.1 Homo sapiens cDNA FLJ50917 complete cds, highly similar to Propionyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.3) P
AK295312.1 Homo sapiens cDNA FLJ54352 complete cds, highly similar to Propionyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.3) PA
S67325.1 propionyl CoA carboxylase beta subunit [human, liver, placenta, HL1008, mRNA, 1791 nt] P
NM_001178014.1 Homo sapiens propionyl CoA carboxylase, beta polypeptide (PCCB), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA

EST sequences (10 of 534) [Show all sequences]

R15273.1 Clone IMAGE:29672 brain 5' read
AA902221.1 Clone IMAGE:1519223 uncharacterized tissue 3' read P
AI094852.1 Clone IMAGE:1687509 brain 3' read A
AI139660.1 Clone IMAGE:1710968 uterus 3' read A
CB052378.1 Clone IMAGE:3290262 uncharacterized tissue 3' read PA
CB052379.1 Clone IMAGE:3290262 uncharacterized tissue 5' read P
BX110169.1 Clone IMAGp998I13280_;_IMAGE:49205 brain PA
BX117851.1 Clone IMAGp998J21524_;_IMAGE:243572 mixed
R25459.1 Clone IMAGE:132313 placenta 5' read
R25544.1 Clone IMAGE:36491 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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