Isoprenoid synthase domain containing (ISPD)

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UGID:2143396 UniGene Hs.636502 Homo sapiens (human) ISPD

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Isoprenoid synthase domain containing (ISPD)

Human protein-coding gene ISPD. Represented by 34 ESTs from 12 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2143396 - Hs.636502]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001094896.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ISPD gene product	H. sapiens	100.0	450
NP_848744.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Ispd gene product	M. musculus	79.4	446
NP_001071270.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ispd gene product	D. rerio	55.5	420
Other hits (2 of 23) [Show all]		Species	Id(%)	Len(aa)
XP_003318374.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: isoprenoid synthase domain-containing protein isoform 1	P. troglodytes	99.3	450
XP_003896299.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: isoprenoid synthase domain-containing protein-like, partial	P. anubis	95.4	262

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; uncharacterized tissue; blood; placenta; uterus; mammary gland; testis; brain; muscle

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	7
Map position:	7p21.2
UniSTS entry:	Chr 1	D11S2921
UniSTS entry:	Chr 1	GDB:335751

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK124805.1	Homo sapiens cDNA FLJ42815 fis, clone BRCAN2014143	A
NM_001101426.3	Homo sapiens isoprenoid synthase domain containing (ISPD), transcript variant 1, mRNA	PA
NM_001101417.3	Homo sapiens isoprenoid synthase domain containing (ISPD), transcript variant 2, mRNA	PA

EST sequences (10 of 34) [Show all sequences]

BX279648.1	Clone IMAGp998O168906	uncharacterized tissue	5' read	P
BX281650.1	Clone IMAGp998I197872	uncharacterized tissue	5' read	P
BX329624.1	Clone CS0DC022YF16	uncharacterized tissue	3' read	A
BX349946.2	Clone CS0DC022YF16	uncharacterized tissue	3' read	P
BX354618.2	Clone CS0DC022YF16	uncharacterized tissue	3' read
BX343627.1	Clone CS0DI004YB21	placenta	3' read
BX343628.2	Clone CS0DI004YB21	placenta	5' read
BX362268.2	Clone CS0DJ012YB21	blood	3' read
BX372034.2	Clone CS0DJ012YB21	blood	3' read
CD511842.1	Clone IMAGE:30407053	mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria