> Glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (GPCPD1)
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UGID:2143253     UniGene Hs.636359     Homo sapiens (human)   GPCPD1 Order cDNA clone, Links
Glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (GPCPD1)

Human protein-coding gene GPCPD1. Represented by 366 ESTs from 175 cDNA libraries. Corresponds to reference sequence NM_019593.3. [UniGene 2143253 - Hs.636359]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_514503.2 PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1 isoform 2 P. troglodytes 100.0 671
NP_062539.1 GPCPD1 gene product H. sapiens 100.0 671
XP_003905095.1 PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1 P. anubis 99.7 671
NP_083078.3 glycerophosphocholine phosphodiesterase GPCPD1 isoform 2 M. musculus 94.7 674
NP_001090135.1 glycerophosphocholine phosphodiesterase GDE1 homolog X. laevis 79.4 666
NP_001103993.1 preimplantation protein 4-like D. rerio 68.0 660
NP_722936.1 CG2818, isoform B D. melanogaster 48.5 194
NP_001024784.2 Protein K10B3.6, isoform a C. elegans 46.5 174
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_002798259.1 PREDICTED: putative glycerophosphodiester phosphodiesterase 5-like M. mulatta 99.0 664
XP_001915521.1 PREDICTED: putative glycerophosphocholine phosphodiesterase GPCPD1 E. caballus 98.7 672

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uterus; mixed; brain; testis; placenta; uncharacterized tissue; embryonic tissue; lung; kidney; intestine; stomach; larynx; mammary gland; cervix; spinal cord; adrenal gland; vascular; mouth; spleen; esophagus; thymus; blood; adipose tissue; skin; pancreas; ascites; lymph node; eye; muscle; liver; trachea; connective tissue; prostate; lymph; bone; ovary; nerve; ganglia; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20p12.3
UniSTS entry: Chr 20 STS-R79720 [Map Viewer]
UniSTS entry: Chr 20 RH103206
UniSTS entry: Chr 20 WI-17673 [Map Viewer]
UniSTS entry: Chr 20 RH64148 [Map Viewer]
UniSTS entry: Chr 20 WI-20801 [Map Viewer]
UniSTS entry: Chr 20 MARC_12069-12070:1004549810:1
UniSTS entry: Chr 20 EST159813 [Map Viewer]
UniSTS entry: Chr 20 STS-R10161 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK001947.1 Homo sapiens cDNA FLJ11085 fis, clone PLACE1005261 P
AB037855.1 Homo sapiens mRNA for KIAA1434 protein, partial cds P
AK308111.1 Homo sapiens cDNA, FLJ98059 P
BC027588.2 Homo sapiens hypothetical protein KIAA1434, mRNA (cDNA clone MGC:26147 IMAGE:4827346), complete cds PA
AL049446.1 Homo sapiens mRNA; cDNA DKFZp586A0422 (from clone DKFZp586A0422) A
NM_019593.3 Homo sapiens glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (GPCPD1), mRNA PA

EST sequences (10 of 366) [Show all sequences]

AA974949.1 Clone IMAGE:1555471 kidney 3' read A
AA987577.1 Clone IMAGE:1602501 lung 3' read A
AI016739.1 Clone IMAGE:1638520 testis 3' read
AA923746.1 Clone IMAGE:1543430 mixed 3' read PA
AI032573.1 Clone IMAGE:1652212 mixed 3' read A
AI052554.1 Clone IMAGE:1653390 mixed 3' read
AI056990.1 Clone IMAGE:1674511 mixed 3' read A
AI078172.1 Clone IMAGE:1675130 mixed 3' read A
AI094250.1 Clone IMAGE:1689521 mixed 3' read A
AI138534.1 Clone IMAGE:1735813 testis 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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