> ADP-ribosylation factor-like 6 interacting protein 1 (ARL6IP1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2141776     UniGene Hs.634882     Homo sapiens (human)   ARL6IP1 Order cDNA clone, Links
ADP-ribosylation factor-like 6 interacting protein 1 (ARL6IP1)

Human protein-coding gene ARL6IP1. Represented by 2342 ESTs from 480 cDNA libraries. Corresponds to reference sequence NM_015161.1. [UniGene 2141776 - Hs.634882]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_510852.3 PREDICTED: ADP-ribosylation factor-like protein 6-interacting protein 1 isoform 2 P. troglodytes 100.0 202
NP_055976.1 ARL6IP1 gene product H. sapiens 100.0 202
XP_003639402.1 PREDICTED: ADP-ribosylation factor-like protein 6-interacting protein 1-like C. lupus familiaris 99.5 202
NP_001231142.1 ARL6IP1 gene product S. scrofa 99.5 202
NP_062292.1 ADP-ribosylation factor-like protein 6-interacting protein 1 M. musculus 98.5 202
NP_001087768.1 MGC84453 protein X. laevis 88.2 202
NP_957406.1 arl6ip1 gene product D. rerio 83.7 202
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
NP_001071625.1 ARL6IP1 gene product B. taurus 99.3 141
XP_001082004.2 PREDICTED: ADP-ribosylation factor-like protein 6-interacting protein 1-like M. mulatta 99.2 262

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; liver; uncharacterized tissue; embryonic tissue; uterus; lung; intestine; skin; placenta; prostate; eye; pancreas; pharynx; mixed; blood; mammary gland; stomach; vascular; muscle; connective tissue; bladder; thymus; bone marrow; ovary; thyroid; esophagus; spleen; heart; ascites; adrenal gland; umbilical cord; mouth; cervix; bone; larynx; trachea; salivary gland; parathyroid; lymph node; nerve; epididymis; lymph; pituitary gland; pineal gland; ganglia; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12-p11.2
UniSTS entry: Chr 16 D16S3202 [Map Viewer]
UniSTS entry: Chr 16 RH25299
UniSTS entry: Chr 1 D16S3226
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX648446.1 Homo sapiens mRNA; cDNA DKFZp686H13259 (from clone DKFZp686H13259) PA
BC010281.1 Homo sapiens ADP-ribosylation factor-like 6 interacting protein 1, mRNA (cDNA clone MGC:5360 IMAGE:3048642), complete cds PA
AK291137.1 Homo sapiens cDNA FLJ76399 complete cds, highly similar to Homo sapiens ADP-ribosylation factor-like 6 interacting protein (ARL6IP), mRNA P
AK308744.1 Homo sapiens cDNA, FLJ98785
AK308092.1 Homo sapiens cDNA, FLJ98040 P
AK307315.1 Homo sapiens cDNA, FLJ97263 P
AK301636.1 Homo sapiens cDNA FLJ50719 complete cds, highly similar to ARL-6-interacting protein 1 P
AK300869.1 Homo sapiens cDNA FLJ50699 complete cds, moderately similar to ARL-6-interacting protein 1 P
AK300825.1 Homo sapiens cDNA FLJ51781 complete cds, highly similar to ARL-6-interacting protein 1 P
D31885.1 Homo sapiens KIAA0069 mRNA, partial cds P
NM_015161.1 Homo sapiens ADP-ribosylation factor-like 6 interacting protein 1 (ARL6IP1), mRNA PA

EST sequences (10 of 2342) [Show all sequences]

AA862706.1 Clone IMAGE:1469110 uncharacterized tissue 3' read P
AA903068.1 Clone IMAGE:1516986 uncharacterized tissue 3' read A
AA970611.1 Clone IMAGE:1579356 mixed 3' read A
AA970902.1 Clone IMAGE:1572663 kidney 3' read A
AA897635.1 Clone IMAGE:1503892 mixed 3' read A
AA908191.1 Clone IMAGE:1522555 lung 3' read A
AI003733.1 Clone IMAGE:392023 pineal gland 3' read
AI004230.1 Clone IMAGE:1625226 embryonic tissue 3' read A
AI005484.1 Clone IMAGE:1626255 mixed 3' read A
AI014764.1 Clone IMAGE:1611168 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help