> Histone cluster 2, H2bf (HIST2H2BF)
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UGID:2139345     UniGene Hs.632451     Homo sapiens (human)   HIST2H2BF Order cDNA clone, Links
Histone cluster 2, H2bf (HIST2H2BF)

Human protein-coding gene HIST2H2BF. Represented by 58 ESTs from 43 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2139345 - Hs.632451]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892600.1 PREDICTED: histone H2B type 2-F-like isoform 2 P. anubis 100.0 133
XP_003308398.1 PREDICTED: histone H2B type 2-F-like isoform 4 P. troglodytes 100.0 133
NP_783597.2 histone H2B type 2-B M. musculus 100.0 125
XP_003753686.1 PREDICTED: histone H2B type 2-B-like R. norvegicus 100.0 125
XP_540282.1 PREDICTED: histone H2B type 2-F-like C. lupus familiaris 100.0 125
XP_001500135.1 PREDICTED: histone H2B type 2-F-like E. caballus 100.0 125
XP_003355256.1 PREDICTED: histone H2B type 2-F-like isoform 1 S. scrofa 100.0 125
XP_002686105.1 PREDICTED: histone H2B type 2-F B. taurus 100.0 125
XP_004002472.1 PREDICTED: histone H2B type 2-F-like isoform 1 O. aries 100.0 125
XP_003846579.1 PREDICTED: uncharacterized protein LOC100996713 H. sapiens 97.3 262
NP_001086753.1 histone H2B 1.1 X. laevis 93.7 125
NP_956411.1 hist2h2l gene product D. rerio 92.9 125
NP_724342.1 histone H2B D. melanogaster 91.8 121
NP_505464.1 Protein HIS-41 C. elegans 89.3 121
NP_009553.1 Htb2p S. cerevisiae 79.2 120
XP_959440.1 histone H2B N. crassa 79.0 124
NP_197679.1 histone H2B A. thaliana 73.0 136
XP_001700194.1 histone H2B variant C. reinhardtii 72.7 120
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_001515083.1 PREDICTED: histone H2B type 2-B-like O. anatinus 99.2 125
XP_002714253.1 PREDICTED: histone cluster 1, H2bd-like O. cuniculus 99.2 125

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; uterus; spleen; blood; testis; mixed; pharynx; ovary; uncharacterized tissue; bladder; prostate; intestine; stomach; esophagus; embryonic tissue; trachea; thymus; lung; eye; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_001024599.4 Homo sapiens histone cluster 2, H2bf (HIST2H2BF), transcript variant 1, mRNA P
BC110793.1 Homo sapiens histone cluster 2, H2bf, mRNA (cDNA clone MGC:131639 IMAGE:5224812), complete cds PA
AK289664.1 Homo sapiens cDNA FLJ77920 complete cds, highly similar to Homo sapiens histone 1, H2bh (HIST1H2BH), mRNA P
AK092418.1 Homo sapiens cDNA FLJ35099 fis, clone PLACE6006287 PA
AK299108.1 Homo sapiens cDNA FLJ56787 complete cds, highly similar to Histone H2B type 2-F P
AK296916.1 Homo sapiens cDNA FLJ56780 complete cds, highly similar to Histone H2B type 2-F P
NM_001161334.1 Homo sapiens histone cluster 2, H2bf (HIST2H2BF), transcript variant 2, mRNA P

EST sequences (10 of 58) [Show all sequences]

AI147174.1 Clone IMAGE:1510099 mixed 3' read
BX282515.1 Clone IMAGp998N1811573_;_IMAGE:5227985 mixed P
AI886387.1 Clone IMAGE:2443614 uterus 3' read
AI886388.1 Clone IMAGE:2443616 uterus 3' read
CD109968.1 Clone IMAGE:30346727 placenta 5' read P
CD698245.1 pharynx
AW962972.1 uncharacterized tissue
BE293545.1 Clone IMAGE:2959624 intestine 5' read
CX167296.1 Clone IMAGE:7471328 embryonic tissue 5' read
BE618010.1 Clone IMAGE:3865767 eye 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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