> Aryl hydrocarbon receptor nuclear translocator (ARNT)
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UGID:2139340     UniGene Hs.632446     Homo sapiens (human)   ARNT Links
Aryl hydrocarbon receptor nuclear translocator (ARNT)

Human protein-coding gene ARNT. Represented by 298 ESTs from 183 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2139340 - Hs.632446]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001659.1 ARNT gene product H. sapiens 100.0 788
XP_003892643.1 PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1 P. anubis 99.8 788
XP_001170422.2 PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1 P. troglodytes 99.7 857
NP_001032826.1 Arnt gene product M. musculus 95.3 790
NP_001083622.1 aryl hydrocarbon receptor nuclear translocator X. laevis 83.0 764
NP_571749.1 arnt2 gene product D. rerio 76.2 733
NP_731308.1 tango, isoform A D. melanogaster 71.3 401
NP_492687.1 Aryl Hydrocarbon receptor Associated protein family member (aha-1) C. elegans 59.4 369
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001106465.2 PREDICTED: aryl hydrocarbon receptor nuclear translocator M. mulatta 99.1 788
XP_001929705.3 PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2 S. scrofa 98.2 765

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; placenta; lung; uncharacterized tissue; kidney; eye; pharynx; vascular; esophagus; bladder; skin; stomach; cervix; spinal cord; intestine; mouth; blood; uterus; mammary gland; prostate; muscle; pancreas; amniotic fluid; larynx; bone; spleen; ovary; connective tissue; embryonic tissue; liver; heart; lymph node; trachea; thymus; nerve; thyroid; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21
UniSTS entry: Chr 1 D1S3284 [Map Viewer]
UniSTS entry: Chr 1 SGC30626 [Map Viewer]
UniSTS entry: Chr 1 D1S3204 [Map Viewer]
UniSTS entry: Chr 1 WI-16757 [Map Viewer]
UniSTS entry: Chr 1 G15891
UniSTS entry: Chr 1 RH11989 [Map Viewer]
UniSTS entry: Chr 1 RH93022
UniSTS entry: Chr 1 ARNT_2212
UniSTS entry: Chr 1 RH46003 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

NM_178427.2 Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 3, mRNA PA
NM_001668.3 Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 1, mRNA PA
M69238.1 Human aryl hydrocarbon receptor nuclear translocator (ARNT) mRNA, complete cds PA
AB209877.1 Homo sapiens mRNA for aryl hydrocarbon receptor nuclear translocator isoform 1 variant protein P
AK290177.1 Homo sapiens cDNA FLJ78555 complete cds, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 1, mRNA P
AK293027.1 Homo sapiens cDNA FLJ78688 complete cds, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 1, mRNA P
AK291705.1 Homo sapiens cDNA FLJ75039 complete cds, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 3, mRNA P
AK313780.1 Homo sapiens cDNA, FLJ94387, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), mRNA P
AK315812.1 Homo sapiens cDNA, FLJ79461 complete cds, highly similar to Aryl hydrocarbon receptor nuclear translocator P
AL834279.1 Homo sapiens mRNA; cDNA DKFZp547B0614 (from clone DKFZp547B0614) PA
AK304772.1 Homo sapiens cDNA FLJ54656 complete cds, highly similar to Aryl hydrocarbon receptor nuclear translocator P
BC028362.1 Homo sapiens cDNA clone IMAGE:4828364, containing frame-shift errors PA
NM_001197325.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 4, mRNA P
BC041121.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator, mRNA (cDNA clone IMAGE:5555271) PA
AF001307.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT) mRNA, splice variant, complete cds P

EST sequences (10 of 298) [Show all sequences]

R14892.1 Clone IMAGE:129563 mixed 3' read A
BX102166.1 Clone IMAGp998H154200_;_IMAGE:1655102 mixed
AI185449.1 Clone IMAGE:1742730 lung 3' read A
AI216772.1 Clone IMAGE:1884529 lung 3' read
T06770.1 Clone HFBDY57 brain
CB157166.1 Clone L17N670205n1-7-B01 liver 5' read
CB164080.1 Clone L17N670205n1-37-F04 liver 5' read
CB158155.1 Clone L18POOL1n1-8-F07 liver 5' read
AA911260.1 Clone IMAGE:1520421 kidney 3' read A
AI290605.1 Clone IMAGE:1880458 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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