> RUN domain containing 1 (RUNDC1)
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UGID:2139149     UniGene Hs.632255     Homo sapiens (human)   RUNDC1 Order cDNA clone, Links
RUN domain containing 1 (RUNDC1)

Human protein-coding gene RUNDC1. Represented by 136 ESTs from 89 cDNA libraries. Corresponds to reference sequence NM_173079.2. [UniGene 2139149 - Hs.632255]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_511527.3 PREDICTED: RUN domain-containing protein 1 P. troglodytes 100.0 624
NP_775102.2 RUNDC1 gene product H. sapiens 100.0 612
NP_766154.2 Rundc1 gene product M. musculus 93.0 614
XP_003198160.1 PREDICTED: RUN domain-containing protein 1-like D. rerio 75.7 547
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001112624.1 PREDICTED: RUN domain-containing protein 1-like M. mulatta 99.2 612
XP_003913165.1 PREDICTED: RUN domain-containing protein 1 isoform 1 P. anubis 99.2 612

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; prostate; brain; uncharacterized tissue; mammary gland; embryonic tissue; liver; pancreas; mouth; skin; nerve; placenta; kidney; intestine; testis; connective tissue; muscle; eye; blood; uterus; ovary; cervix; lymph; thymus; spleen; ear; ascites; salivary gland; lung; stomach; bone; lymph node; adrenal gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.31
UniSTS entry: Chr 17 SHGC-32804 [Map Viewer]
UniSTS entry: Chr 17 RH47209
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 L17809
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY189284.1 Homo sapiens LP5161 protein mRNA, complete cds PA
BC014873.1 Homo sapiens RUN domain containing 1, mRNA (cDNA clone IMAGE:4384737), partial cds PA
AK055627.1 Homo sapiens cDNA FLJ31065 fis, clone HSYRA2001142
AK310125.1 Homo sapiens cDNA, FLJ17167 P
AL831813.1 Homo sapiens mRNA; cDNA DKFZp761H0421 (from clone DKFZp761H0421) PA
AK303115.1 Homo sapiens cDNA FLJ55418 complete cds, highly similar to Homo sapiens RUN domain containing 1 (RUNDC1), mRNA P
BC039247.1 Homo sapiens RUN domain containing 1, mRNA (cDNA clone MGC:33375 IMAGE:5271271), complete cds PA
NM_173079.2 Homo sapiens RUN domain containing 1 (RUNDC1), mRNA P

EST sequences (10 of 136) [Show all sequences]

AA910502.1 Clone IMAGE:1516853 uncharacterized tissue 3' read
AA887449.1 Clone IMAGE:1500862 kidney 3' read
AI141257.1 Clone IMAGE:1689856 mixed 3' read
AI244142.1 Clone IMAGE:1988840 uterus 3' read
AI291845.1 Clone IMAGE:1895596 lung 3' read
AI309843.1 Clone IMAGE:1914467 kidney 3' read
AI341751.1 Clone IMAGE:1938726 embryonic tissue 3' read
AI351507.1 Clone IMAGE:1940041 embryonic tissue 3' read
U25773.1 Clone 694:1 mammary gland P
AI374666.1 Clone IMAGE:2065754 embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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