> Mediterranean fever (MEFV)
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UGID:2139115     UniGene Hs.632221     Homo sapiens (human)   MEFV Order cDNA clone, Links
Mediterranean fever (MEFV)

Human protein-coding gene MEFV. Represented by 8 ESTs from 7 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2139115 - Hs.632221]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000234.1 MEFV gene product H. sapiens 100.0 780
NP_062326.2 Mefv gene product M. musculus 51.8 749
XP_683612.5 PREDICTED: nuclear factor 7, ovary D. rerio 47.8 182
NP_001088240.1 uncharacterized protein LOC495071 X. laevis 47.4 173
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_523280.3 PREDICTED: pyrin isoform 2 P. troglodytes 98.5 780
XP_001092338.1 PREDICTED: pyrin M. mulatta 90.6 785

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: blood; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.3
UniSTS entry: Chr 1 L17971
UniSTS entry: Chr 1 L17705
UniSTS entry: Chr 1 L17688
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 GDB:434012
UniSTS entry: Chr 1 D15S1477
UniSTS entry: Chr 1 GDB:314949
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_000243.2 Homo sapiens Mediterranean fever (MEFV), transcript variant 1, mRNA PA
BC101537.1 Homo sapiens Mediterranean fever, mRNA (cDNA clone MGC:126586 IMAGE:8069043), complete cds P
BC101511.1 Homo sapiens Mediterranean fever, mRNA (cDNA clone MGC:126560 IMAGE:8069017), complete cds P
FJ785722.1 Homo sapiens pyrin/marenostrin variant 2delta9ext (MEFV) mRNA, complete cds, alternatively spliced P
FJ785717.1 Homo sapiens pyrin/marenostrin variant del234 (MEFV) mRNA, complete cds, alternatively spliced P
FJ785721.1 Homo sapiens pyrin/marenostrin variant del34-del78 (MEFV) mRNA, complete cds, alternatively spliced P
FJ785720.1 Homo sapiens pyrin/marenostrin variant del2345 (MEFV) mRNA, complete cds, alternatively spliced P
FJ785719.1 Homo sapiens pyrin/marenostrin variant del234-del78 (MEFV) mRNA, complete cds, alternatively spliced P
FJ785718.1 Homo sapiens pyrin/marenostrin variant del234-del7 (MEFV) mRNA, complete cds, alternatively spliced P
NM_001198536.1 Homo sapiens Mediterranean fever (MEFV), transcript variant 2, mRNA P
AF018080.1 Homo sapiens PYRIN (MEFV) mRNA, complete cds PA
Y14441.1 Homo sapiens mRNA for Marenostrin protein, complete P

EST sequences (8)

CD639999.1 Clone IMAGE:30414664 blood 5' read P
AW440869.1 Clone IMAGE:2918151 blood 3' read
DB097951.1 Clone TESTI4049338 testis 5' read P
BI024282.1 blood
DC428681.1 Clone NETRP2001146 blood 5' read P
BI907993.1 Clone IMAGE:5217897 blood 5' read P
BM922554.1 Clone IMAGE:5755598 blood 5' read
HY193649.1 Clone H04D033C19 testis P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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