> Sialophorin (SPN)
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UGID:2139082     UniGene Hs.632188     Homo sapiens (human)   SPN Order cDNA clone, Links
Sialophorin (SPN)

Human protein-coding gene SPN. Represented by 94 ESTs from 48 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2139082 - Hs.632188]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003114.1 SPN gene product H. sapiens 100.0 399
NP_033285.1 Spn gene product M. musculus 59.8 388
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
XP_523332.2 PREDICTED: leukosialin isoform 3 P. troglodytes 99.0 399
XP_003918770.1 PREDICTED: leukosialin P. anubis 88.2 422

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: thymus; uncharacterized tissue; blood; mixed; spleen; prostate; lymph; lung; intestine; brain; liver; bone marrow; connective tissue; mammary gland; larynx; kidney; skin; thyroid; bone; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 GDB:180921
UniSTS entry: Chr 1 D11S2560
UniSTS entry: Chr 10 RH70827
UniSTS entry: Chr 1 GDB:313783
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 G35510
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 16 RH67531
UniSTS entry: Chr 16 RH93020
UniSTS entry: Chr 16 G32839
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_003123.4 Homo sapiens sialophorin (SPN), transcript variant 2, mRNA P
NM_001030288.2 Homo sapiens sialophorin (SPN), transcript variant 1, mRNA P
J04536.1 Human sialophorin (CD43) mRNA, complete cds P
BC012350.1 Homo sapiens sialophorin, mRNA (cDNA clone MGC:20177 IMAGE:4564347), complete cds PA
AK292626.1 Homo sapiens cDNA FLJ77999 complete cds, highly similar to Homo sapiens sialophorin (gpL115, leukosialin, CD43), mRNA P
AK313750.1 Homo sapiens cDNA, FLJ94351, Homo sapiens sialophorin (gpL115, leukosialin, CD43) (SPN), mRNA P
BC035510.1 Homo sapiens sialophorin, mRNA (cDNA clone IMAGE:5094058), with apparent retained intron A
X60502.1 Human leukosialin cDNA-II P

EST sequences (10 of 94) [Show all sequences]

BX281550.1 Clone IMAGp998K0510308_;_IMAGE:4478332 uncharacterized tissue
BX340903.2 Clone CS0DJ009YE24 blood 5' read
BX383495.2 Clone CS0DJ011YN16 blood 5' read P
BX443080.2 Clone CS0DG004YK11 uncharacterized tissue 5' read P
BX422623.2 Clone CS0DM012YN02 liver 5' read P
BX452449.2 Clone CS0DM014YA12 liver 5' read P
AW958413.1 uncharacterized tissue
BP296924.2 Clone MPC02101 uncharacterized tissue 5' read P
BP297942.1 Clone MPC04458 uncharacterized tissue 5' read P
BP302955.1 Clone MPE07058 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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