Short chain dehydrogenase/reductase family 16C, member 6, pseudogene (SDR16C6P)

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UGID:2138959 UniGene Hs.632065 Homo sapiens (human) SDR16C6P

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Short chain dehydrogenase/reductase family 16C, member 6, pseudogene (SDR16C6P)

Human pseudo gene SDR16C6P. Represented by 1 ESTs from 1 cDNA libraries. [UniGene 2138959 - Hs.632065]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001151832.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: short-chain dehydrogenase/reductase family 16C member 6-like	P. troglodytes	95.9	218
NP_001074179.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Sdr16c6 gene product	M. musculus	77.2	315
NP_001085721.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	short chain dehydrogenase/reductase family 16C, member 5	X. laevis	58.4	303
NP_620419.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SDR16C5 gene product	H. sapiens	57.6	295
NP_998043.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	sdr16c5a gene product	D. rerio	51.3	305
NP_001122508.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein DHS-3, isoform a	C. elegans	47.0	270
Other hits (2 of 22) [Show all]		Species	Id(%)	Len(aa)
XP_001088564.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: short-chain dehydrogenase/reductase family 16C member 6-like	M. mulatta	89.5	322
XP_003902826.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: short-chain dehydrogenase/reductase family 16C member 6-like	P. anubis	89.2	322

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	8
	Map position:	8q12.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

Model sequences (3)

XR_108906.1	PREDICTED: Homo sapiens short chain dehydrogenase/reductase family 16C, member 6, pseudogene (SDR16C6P), misc_RNA	P
XR_133492.1	PREDICTED: Homo sapiens short chain dehydrogenase/reductase family 16C, member 6, pseudogene (SDR16C6P), misc_RNA	P
XR_171732.1	PREDICTED: Homo sapiens short chain dehydrogenase/reductase family 16C, member 6, pseudogene (SDR16C6P), misc_RNA	P

EST sequences (1)

DN831106.1

Clone MGC1.1.1.1.1.G05

mixed

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria