SCO-spondin homolog (Bos taurus) (SSPO)

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UGID:2138916 UniGene Hs.632022 Homo sapiens (human) SSPO

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SCO-spondin homolog (Bos taurus) (SSPO)

Human protein-coding gene SSPO. Represented by 60 ESTs from 19 cDNA libraries. Corresponds to reference sequence NM_198455.2. [UniGene 2138916 - Hs.632022]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_940857.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SSPO gene product	H. sapiens	100.0	5146
XP_003086561.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: SCO-spondin-like isoform 2	M. musculus	76.9	5144
XP_001920334.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: SCO-spondin	D. rerio	53.4	4317
Other hits (2 of 14) [Show all]		Species	Id(%)	Len(aa)
XP_003951224.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: SCO-spondin	P. troglodytes	97.1	5162
XP_003896874.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: SCO-spondin	P. anubis	94.4	5157

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; brain; ovary; lung; eye; lymph node; uncharacterized tissue; testis; pituitary gland; prostate; connective tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	7
	Map position:	7q36.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK127639.1	Homo sapiens cDNA FLJ45737 fis, clone JCMLC2002751	P
AK124542.1	Homo sapiens cDNA FLJ42551 fis, clone BRACE3005145	P
AK123170.1	Homo sapiens cDNA FLJ41175 fis, clone BRACE2042550	P
AB111888.1	Homo sapiens mRNA for KIAA2036 protein	P
AY927598.1	Homo sapiens mRNA sequence	P
AY927597.1	Homo sapiens mRNA sequence
AY927596.1	Homo sapiens mRNA sequence	P
NM_198455.2	Homo sapiens SCO-spondin homolog (Bos taurus) (SSPO), mRNA	P
AK093431.1	Homo sapiens cDNA FLJ36112 fis, clone TESTI2022023, weakly similar to Bos taurus Reissner's fiber glycoprotein I mRNA	P

EST sequences (10 of 60) [Show all sequences]

BX112063.1	Clone IMAGp998P125802_;_IMAGE:2338811	lung		A
AI692966.1	Clone IMAGE:2338811	lung	3' read	A
AI732379.1	Clone IMAGE:930075	ovary		A
CD243133.1	Clone IMAGE:30384214	pituitary gland	5' read	P
CF144246.1	Clone IMAGE:30567755	lymph node	5' read	P
AW470226.1	Clone IMAGE:2870448	lung	3' read
AW500878.1	Clone IMAGE:3073269	lymph node	5' read	P
BU102155.1		mixed		P
CR748964.1	Clone IMAGp998A138400_;_IMAGE:3439380	brain	5' read	P
DN831619.1	Clone MGC1.5.1.1.1.H08	mixed

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria