> Solute carrier family 39 (zinc transporter), member 7 (SLC39A7)
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UGID:2138889     UniGene Hs.631995     Homo sapiens (human)   SLC39A7 Order cDNA clone, Links
Solute carrier family 39 (zinc transporter), member 7 (SLC39A7)

Human protein-coding gene SLC39A7. Represented by 556 ESTs from 243 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2138889 - Hs.631995]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_008910.2 SLC39A7 gene product H. sapiens 100.0 468
XP_003311256.2 PREDICTED: LOW QUALITY PROTEIN: zinc transporter SLC39A7 P. troglodytes 99.8 428
NP_001071177.1 Slc39a7 gene product M. musculus 92.4 475
NP_001121291.1 solute carrier family 39 (zinc transporter), member 7 precursor X. laevis 65.1 457
NP_571006.2 slc39a7 gene product D. rerio 62.2 420
NP_524931.1 catecholamines up D. melanogaster 58.3 402
NP_510563.2 Protein HKE-4.2 C. elegans 53.1 428
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002803736.1 PREDICTED: zinc transporter SLC39A7-like isoform 1 M. mulatta 98.5 468
XP_003897485.1 PREDICTED: zinc transporter SLC39A7 P. anubis 98.5 468

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; intestine; uncharacterized tissue; mammary gland; muscle; connective tissue; ovary; testis; mouth; eye; prostate; salivary gland; uterus; lung; stomach; embryonic tissue; kidney; liver; umbilical cord; mixed; vascular; blood; skin; thymus; esophagus; trachea; adrenal gland; ascites; pancreas; cervix; pituitary gland; spleen; bladder; thyroid; bone marrow; lymph node; adipose tissue; nerve; bone; larynx; pharynx; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: Chr 6 MARC_5891-5892:991939781:1
UniSTS entry: Chr 6 PMC321570P8
UniSTS entry: Chr 6 RH66534
UniSTS entry: Chr 6 SLC39A7_3898
UniSTS entry: Chr 17 SGC32927 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_006979.2 Homo sapiens solute carrier family 39 (zinc transporter), member 7 (SLC39A7), transcript variant 1, mRNA PA
BC000645.2 Homo sapiens solute carrier family 39 (zinc transporter), member 7, mRNA (cDNA clone MGC:1928 IMAGE:3345970), complete cds PA
AK225682.1 Homo sapiens mRNA for Zinc transporter SLC39A7 variant, clone: SYN03265 P
AK225282.1 Homo sapiens mRNA for Zinc transporter SLC39A7 variant, clone: HEP00938 PA
NM_001077516.1 Homo sapiens solute carrier family 39 (zinc transporter), member 7 (SLC39A7), transcript variant 2, mRNA PA
AK301126.1 Homo sapiens cDNA FLJ54178 complete cds, highly similar to Zinc transporter SLC39A7 P
AK303158.1 Homo sapiens cDNA FLJ52943 complete cds, highly similar to Zinc transporter SLC39A7 P
D82060.1 Homo sapiens mRNA for membrane protein with histidine rich charge clusters, complete cds P
M58660.1 Human MHC HLA-D region non-class II protein (RING5) mRNA, partial cds

EST sequences (10 of 556) [Show all sequences]

AA971331.1 Clone IMAGE:1582528 mixed 3' read A
AA991486.1 Clone IMAGE:1612763 uncharacterized tissue 3' read A
BX095962.1 Clone IMAGp998E186082_;_IMAGE:2446073 stomach A
CB107807.1 Clone L3SNU475-17-B05 liver 5' read P
CB135931.1 Clone L5HLK1-27-E07 liver 5' read
CB131677.1 Clone C1SNU17s1-1-A06 cervix 5' read
AI283018.1 Clone IMAGE:1892786 placenta 3' read A
AI298154.1 Clone IMAGE:1896220 lung 3' read P
AI369736.1 Clone IMAGE:2017543 brain 3' read A
AI473558.1 Clone IMAGE:2144040 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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