> Small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2)
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UGID:2138754     UniGene Hs.631860     Homo sapiens (human)   SNAPC2 Order cDNA clone, Links
Small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2)

Human protein-coding gene SNAPC2. Represented by 259 ESTs from 120 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2138754 - Hs.631860]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003074.1 SNAPC2 gene product H. sapiens 100.0 333
NP_001238815.1 snRNA-activating protein complex subunit 2 P. troglodytes 99.7 333
NP_598729.1 Snapc2 gene product M. musculus 67.4 358
NP_178626.1 glycine-rich protein A. thaliana 50.2 209
NP_001188905.1 cuticular protein 47Ef, isoform D D. melanogaster 47.3 222
NP_001023025.1 Protein GRL-25, isoform a C. elegans 46.3 216
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003919438.1 PREDICTED: snRNA-activating protein complex subunit 2 P. anubis 97.0 332
XP_001093136.1 PREDICTED: snRNA-activating protein complex subunit 2 M. mulatta 96.7 332

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; brain; uncharacterized tissue; skin; pancreas; mixed; embryonic tissue; kidney; blood; liver; spleen; thyroid; uterus; lymph node; lung; salivary gland; vascular; testis; lymph; cervix; placenta; ovary; mammary gland; adipose tissue; eye; bone; intestine; nerve; heart; ascites; connective tissue; stomach; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13
UniSTS entry: Chr 19 RH98907
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BX647416.1 Homo sapiens mRNA; cDNA DKFZp686D19158 (from clone DKFZp686D19158) PA
NM_003083.3 Homo sapiens small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2), transcript variant 1, mRNA PA
AK222926.1 Homo sapiens mRNA for small nuclear RNA activating complex, polypeptide 2, 45kDa variant, clone: HRC06570 P
U44755.1 Human PSE-binding factor PTF delta subunit mRNA, complete cds P
U44898.1 Human SNAP45 subunit mRNA, complete cds P
BC011868.2 Homo sapiens small nuclear RNA activating complex, polypeptide 2, 45kDa, mRNA (cDNA clone MGC:20078 IMAGE:4545178), complete cds PA
AK314878.1 Homo sapiens cDNA, FLJ95779, highly similar to Homo sapiens small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2), mRNA P
NR_030717.1 Homo sapiens small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2), transcript variant 2, non-coding RNA PA

EST sequences (10 of 259) [Show all sequences]

AA928825.1 Clone IMAGE:1564810 mixed 3' read A
AI091961.1 Clone IMAGE:1691064 heart 3' read A
AI095024.1 Clone IMAGE:1687139 brain 3' read A
CB047269.1 Clone IMAGE:3253418 kidney 5' read
AI148204.1 Clone IMAGE:1680192 skin 3' read A
BX103456.1 Clone IMAGp998D17163_;_IMAGE:36582 brain A
AI167730.1 Clone IMAGE:1682563 skin 3' read A
R25723.1 Clone IMAGE:36582 brain 5' read
CB108891.1 Clone L3SNU475-29-C05 liver 5' read P
CB130318.1 Clone L12JSHC0-6-E04 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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