Catsper channel auxiliary subunit delta (CATSPERD)

Restricted Expression:

adrenal tumor [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; uncharacterized tissue; mixed; brain; muscle; adrenal gland

NCBI

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Finding cDNAs

UGID:2138736 UniGene Hs.631842 Homo sapiens (human) CATSPERD

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Catsper channel auxiliary subunit delta (CATSPERD)

Human protein-coding gene CATSPERD. Represented by 32 ESTs from 12 cDNA libraries. EST representation biased toward adrenal tumor. Corresponds to reference sequence NM_152784.3. [UniGene 2138736 - Hs.631842]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_689997.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CATSPERD gene product	H. sapiens	100.0	797
NP_780559.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cation channel sperm-associated protein subunit delta precursor	M. musculus	56.2	770
Other hits (2 of 8) [Show all]		Species	Id(%)	Len(aa)
XP_003914779.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cation channel sperm-associated protein subunit delta	P. anubis	91.1	752
XP_003316084.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: cation channel sperm-associated protein subunit delta	P. troglodytes	88.6	698

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	19
Map position:	19p13.3
UniSTS entry:	Chr 1	D11S3114
UniSTS entry:	Chr 1	RH79802
UniSTS entry:	Chr 1	GDB:631802
UniSTS entry:	Chr 1	PMC156606P2
UniSTS entry:	Chr 1	PMC156606P3
UniSTS entry:	Chr 1	PMC156606P4
UniSTS entry:	Chr 1	D8S2278
UniSTS entry:	Chr 1	D8S2279

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC043005.1	Homo sapiens transmembrane protein 146, mRNA (cDNA clone MGC:44446 IMAGE:5297674), complete cds	PA
AK128088.1	Homo sapiens cDNA FLJ46209 fis, clone TESTI4011616	P
BC031233.1	Homo sapiens transmembrane protein 146, mRNA (cDNA clone IMAGE:4838128), partial cds	PA
NM_152784.3	Homo sapiens catsper channel auxiliary subunit delta (CATSPERD), mRNA	PA

EST sequences (10 of 32) [Show all sequences]

AA907365.1	Clone IMAGE:1503706	mixed	3' read	P
AA928626.1	Clone IMAGE:1552999	uncharacterized tissue	3' read	P
BX101551.1	Clone IMAGp998H044768_;_IMAGE:1942707	uncharacterized tissue		P
AI203106.1	Clone IMAGE:1942707	uncharacterized tissue	3' read
AI953218.1	Clone IMAGE:2474675	uncharacterized tissue	3' read	P
BX508347.1	Clone DKFZp686A1526	muscle	5' read
AW183238.1	Clone IMAGE:2662960	mixed	3' read
CV024765.1		mixed	5' read	P
BE502510.1	Clone IMAGE:3208462	uncharacterized tissue	3' read
BE672403.1	Clone IMAGE:3223122	uncharacterized tissue	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria