> TBC1 domain family, member 17 (TBC1D17)
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UGID:2138481     UniGene Hs.631587     Homo sapiens (human)   TBC1D17 Order cDNA clone, Links
TBC1 domain family, member 17 (TBC1D17)

Human protein-coding gene TBC1D17. Represented by 594 ESTs from 240 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2138481 - Hs.631587]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_078958.2 TBC1D17 gene product H. sapiens 100.0 647
XP_001173398.1 PREDICTED: TBC1 domain family member 17 isoform 4 P. troglodytes 99.8 647
XP_001115627.1 PREDICTED: TBC1 domain family member 17-like isoform 1 M. mulatta 99.5 647
XP_003915976.1 PREDICTED: TBC1 domain family member 17 isoform 1 P. anubis 99.5 647
NP_001036120.1 Tbc1d17 gene product M. musculus 94.4 643
NP_001166096.1 TBC1 domain family member 15 D. rerio 62.4 638
NP_871967.1 Protein TBC-15 C. elegans 53.1 241
NP_608503.1 Tbc1d15-17, isoform A D. melanogaster 52.6 325
XP_960741.2 GTPase-activating protein GYP7 N. crassa 48.3 178
NP_200071.2 RabGAP/TBC domain-containing protein A. thaliana 48.1 266
Other hits (2 of 46) [Show all]SpeciesId(%)Len(aa)
XP_003127381.1 PREDICTED: TBC1 domain family member 17 isoform 1 S. scrofa 96.9 648
XP_541487.2 PREDICTED: TBC1 domain family member 17 isoform 2 C. lupus familiaris 96.5 647

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; prostate; bladder; uterus; intestine; skin; ovary; uncharacterized tissue; embryonic tissue; lymph node; umbilical cord; thyroid; vascular; adipose tissue; thymus; eye; blood; lung; spleen; testis; muscle; mammary gland; liver; pancreas; connective tissue; kidney; adrenal gland; mixed; cervix; pituitary gland; heart; bone; stomach; epididymis; tonsil; lymph; ascites; mouth; esophagus; ganglia; trachea; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.33
UniSTS entry: Chr 19 MARC_17481-17482:1016467169:1
UniSTS entry: Chr 19 MARC_24330-24331:1030112298:1
UniSTS entry: Chr 19 RH92938
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 19 D19S264E
UniSTS entry: Chr 1 D1S1361
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AY129013.1 Homo sapiens clone FP17814 unknown mRNA PA
AK022230.1 Homo sapiens cDNA FLJ12168 fis, clone MAMMA1000625, weakly similar to GYP7 PROTEIN P
BC003516.1 Homo sapiens TBC1 domain family, member 17, mRNA (cDNA clone MGC:10751 IMAGE:3050014), complete cds PA
NM_024682.2 Homo sapiens TBC1 domain family, member 17 (TBC1D17), transcript variant 1, mRNA PA
AK309412.1 Homo sapiens cDNA, FLJ99453 P
AK092924.1 Homo sapiens cDNA FLJ35605 fis, clone SPLEN2009340 P
AK090606.1 Homo sapiens cDNA FLJ33287 fis, clone BGGI12000067 P
AK300007.1 Homo sapiens cDNA FLJ55654 complete cds, highly similar to TBC1 domain family member 17 PA
AB449903.1 Homo sapiens TBC1D17 mRNA for TBC1 domain family, member 17, complete cds P
NM_001168222.1 Homo sapiens TBC1 domain family, member 17 (TBC1D17), transcript variant 2, mRNA PA

EST sequences (10 of 594) [Show all sequences]

AA987791.1 Clone IMAGE:1588831 kidney 3' read A
AI014353.1 Clone IMAGE:1539129 brain 3' read
R17976.1 Clone IMAGE:32178 brain 5' read P
AI094500.1 Clone IMAGE:1670520 brain 3' read A
CB153114.1 Clone B1T694954-22-H11 brain 5' read P
CB155035.1 Clone B2N807043-32-A03 brain 5' read P
CB148657.1 Clone L15CKK1-43-D11 liver 5' read P
AI304680.1 Clone IMAGE:1913301 intestine 3' read PA
AI306681.1 Clone IMAGE:1992092 uterus 3' read PA
AI361002.1 Clone IMAGE:2010906 brain 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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