> Synaptotagmin V (SYT5)
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UGID:2138460     UniGene Hs.631566     Homo sapiens (human)   SYT5 Order cDNA clone, Links
Synaptotagmin V (SYT5)

Human protein-coding gene SYT5. Represented by 152 ESTs from 46 cDNA libraries. EST representation biased toward pancreas; fetus. Corresponds to reference sequence NM_003180.2. [UniGene 2138460 - Hs.631566]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003171.2 SYT5 gene product H. sapiens 100.0 385
XP_003316731.2 PREDICTED: LOW QUALITY PROTEIN: synaptotagmin-5 P. troglodytes 100.0 339
NP_058604.1 synaptotagmin-5 M. musculus 96.6 385
NP_995619.1 synaptotagmin 1, isoform D D. melanogaster 70.1 241
XP_696277.2 PREDICTED: synaptotagmin-2 D. rerio 69.3 410
NP_001022129.1 Protein SNT-1, isoform a C. elegans 67.9 358
NP_001087607.1 synaptotagmin 1 X. laevis 54.8 345
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_003916162.1 PREDICTED: synaptotagmin-5 isoform 1 P. anubis 99.5 385
XP_001495160.1 PREDICTED: synaptotagmin-5-like E. caballus 98.7 385

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: pancreas [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; uncharacterized tissue; mixed; embryonic tissue; intestine; kidney; testis; lymph; lung; connective tissue; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q|11p
UniSTS entry: Chr 19 RH18176 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC046157.1 Homo sapiens synaptotagmin V, mRNA (cDNA clone MGC:57698 IMAGE:5768093), complete cds PA
AK125182.1 Homo sapiens cDNA FLJ43192 fis, clone FCBBF3028102, highly similar to Synaptotagmin-5 P
NM_003180.2 Homo sapiens synaptotagmin V (SYT5), mRNA PA
DQ090951.1 Homo sapiens synaptotagmin V mRNA, complete cds, alternatively spliced P
AK313067.1 Homo sapiens cDNA, FLJ93546 P
BC033683.1 Homo sapiens synaptotagmin V, mRNA (cDNA clone IMAGE:5192810), partial cds P
BC029962.1 Homo sapiens synaptotagmin V, mRNA (cDNA clone IMAGE:5179368) P
Y19236.1 Homo sapiens partial mRNA for synaptotagmin 5 (SYT5 gene), exons 1, 3, 4 and 5 P
AK295337.1 Homo sapiens cDNA FLJ50152 complete cds, highly similar to Synaptotagmin-5 P

EST sequences (10 of 152) [Show all sequences]

R21342.1 Clone IMAGE:35959 brain 5' read
CB066939.1 Clone IMAGE: pancreas 3' read P
CB067206.1 Clone IMAGE: pancreas 5' read
AI198996.1 Clone IMAGE:1859495 brain 3' read P
AI340263.1 Clone IMAGE:2009377 uncharacterized tissue 3' read P
AI341610.1 Clone IMAGE:2010003 uncharacterized tissue 3' read P
AI569711.1 Clone IMAGE:2166687 brain 3' read P
AI651936.1 Clone IMAGE:2309202 uncharacterized tissue 3' read P
AI659957.1 Clone IMAGE:2346489 intestine 3' read P
R46388.1 Clone IMAGE:35959 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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