> Oligonucleotide/oligosaccharide-binding fold containing 1 (OBFC1)
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UGID:138930     UniGene Hs.62314     Homo sapiens (human)   OBFC1 Order cDNA clone, Links
Oligonucleotide/oligosaccharide-binding fold containing 1 (OBFC1)

Human protein-coding gene OBFC1. Represented by 243 ESTs from 144 cDNA libraries. Corresponds to reference sequence NM_024928.4. [UniGene 138930 - Hs.62314]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_508016.2 PREDICTED: CST complex subunit STN1 isoform 2 P. troglodytes 100.0 367
NP_079204.2 OBFC1 gene product H. sapiens 100.0 367
NP_780569.1 CST complex subunit STN1 M. musculus 74.5 376
NP_956683.1 obfc1 gene product D. rerio 54.4 228
NP_001089721.1 oligonucleotide/oligosaccharide-binding fold containing 1 X. laevis 50.4 273
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001114080.1 PREDICTED: CST complex subunit STN1-like isoform 2 M. mulatta 98.6 367
XP_003904268.1 PREDICTED: CST complex subunit STN1 P. anubis 98.4 367

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; placenta; pancreas; intestine; muscle; embryonic tissue; spleen; esophagus; thyroid; bone marrow; testis; ovary; pharynx; mouth; mixed; adrenal gland; blood; skin; heart; connective tissue; eye; uterus; stomach; bone; parathyroid; kidney; prostate; liver; lymph node; lymph; thymus; bladder; salivary gland; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24.33
UniSTS entry: Chr 10 RH103069
UniSTS entry: Chr 10 SHGC-57644
UniSTS entry: Chr 10 WI-14778 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK026212.1 Homo sapiens cDNA: FLJ22559 fis, clone HSI01591 PA
NM_024928.4 Homo sapiens oligonucleotide/oligosaccharide-binding fold containing 1 (OBFC1), mRNA PA
BC017400.2 Homo sapiens oligonucleotide/oligosaccharide-binding fold containing 1, mRNA (cDNA clone MGC:2472 IMAGE:3029792), complete cds PA
AK057720.1 Homo sapiens cDNA FLJ33158 fis, clone UTERU2000418 A

EST sequences (10 of 243) [Show all sequences]

AI078563.1 Clone IMAGE:1677551 mixed 3' read
AI123357.1 Clone IMAGE:1683528 parathyroid 3' read A
AI084747.1 Clone IMAGE:1681583 skin 3' read A
BX108220.1 Clone IMAGp998B15621_;_IMAGE:280622 brain
BX091720.1 Clone IMAGp998E014604_;_IMAGE:1879656 mixed
CB159934.1 Clone L18POOL1n1-43-G06 liver 5' read P
AA886110.1 Clone IMAGE:1274627 bone A
AI285562.1 Clone IMAGE:1968644 lymph node 3' read P
AI288528.1 Clone IMAGE:1879656 mixed 3' read
AI332546.1 Clone IMAGE:1929483 lung 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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