Chromodomain helicase DNA binding protein 9 (CHD9)

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:2091358 UniGene Hs.622347 Homo sapiens (human) CHD9

Links

Chromodomain helicase DNA binding protein 9 (CHD9)

Human protein-coding gene CHD9. Represented by 1 ESTs from 1 cDNA libraries. [UniGene 2091358 - Hs.622347]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_079410.4 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CHD9 gene product	H. sapiens	99.7	290
NP_796198.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Chd9 gene product	M. musculus	84.1	288
XP_001922536.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: chromodomain-helicase-DNA-binding protein 9-like	D. rerio	50.0	287
NP_001085269.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	chromodomain helicase DNA binding protein 7	X. laevis	46.7	291
Other hits (2 of 17) [Show all]		Species	Id(%)	Len(aa)
XP_510966.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 5	P. troglodytes	99.0	290
XP_002808345.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like	M. mulatta	98.0	293

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	lung

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
Map position:	16q12.2
UniSTS entry:	Chr 16	SHGC-60563	[Map Viewer]
UniSTS entry:	Chr 16	SHGC-61158
UniSTS entry:	Chr 16	D16S472E
UniSTS entry:	Chr 16	MARC_16469-16470:1019838682:1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

AY243504.1

Homo sapiens chromatin remodeling factor CHROM3 mRNA, complete cds; alternatively spliced

EST sequences (1)

BU685409.1

Clone UI-CF-DU1-aaw-d-19-0-UI

lung

3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria