> Zinc finger and SCAN domain containing 30 (ZSCAN30)
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UGID:2088851     UniGene Hs.619840     Homo sapiens (human)   ZSCAN30 Links
Zinc finger and SCAN domain containing 30 (ZSCAN30)

Human protein-coding gene ZSCAN30. Represented by 144 ESTs from 85 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2088851 - Hs.619840]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001106205.1 ZSCAN30 gene product H. sapiens 100.0 493
XP_529948.2 PREDICTED: zinc finger and SCAN domain-containing protein 30 isoform 3 P. troglodytes 99.6 493
NP_081283.2 zinc finger protein 397 M. musculus 55.2 525
NP_001089539.1 zinc finger protein 33A X. laevis 53.3 197
NP_001103332.1 zgc:173573 gene product D. rerio 52.0 279
NP_001014498.1 CG1832, isoform B D. melanogaster 48.5 167
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001104028.1 PREDICTED: zinc finger protein 397OS-like isoform 3 M. mulatta 96.1 491
XP_003914348.1 PREDICTED: zinc finger and SCAN domain-containing protein 30 isoform 1 P. anubis 95.9 491

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; liver; thymus; lung; kidney; testis; vascular; pharynx; eye; embryonic tissue; muscle; uterus; connective tissue; mouth; nerve; spleen; thyroid; trachea; parathyroid; blood; tonsil; lymph; heart; pancreas; ovary; prostate; mammary gland; larynx; ganglia; lymph node; placenta; peritoneum; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q12.2
UniSTS entry: Chr 18 SHGC-34458
UniSTS entry: Chr 18 RH16480
UniSTS entry: Chr 18 RH94316
UniSTS entry: RH39232
UniSTS entry: Chr 1 D11S1053
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AY234408.1 Homo sapiens zinc finger protein mRNA, complete cds P
AK128697.1 Homo sapiens cDNA FLJ46864 fis, clone UTERU3011579
AK001503.1 Homo sapiens cDNA FLJ10641 fis, clone NT2RP2005748 A
AK131291.1 Homo sapiens cDNA FLJ16245 fis, clone HCHON2000743 P
AF303374.1 Homo sapiens B-lymphocyte activation-related protein (BC2028) mRNA, complete cds P
AK057518.1 Homo sapiens cDNA FLJ32956 fis, clone TESTI2008161
AK057386.1 Homo sapiens cDNA FLJ32824 fis, clone TESTI2003071, weakly similar to Homo sapiens C2H2 (Kruppel-type) zinc finger protein mRNA P
NM_001112734.2 Homo sapiens zinc finger and SCAN domain containing 30 (ZSCAN30), mRNA PA
AL832180.1 Homo sapiens mRNA; cDNA DKFZp686P1116 (from clone DKFZp686P1116) PA
AK303447.1 Homo sapiens cDNA FLJ56192 complete cds, moderately similar to Zinc finger protein 397 P
NM_001166012.1 Homo sapiens zinc finger and SCAN domain containing 30 (ZSCAN30), mRNA PA

EST sequences (10 of 144) [Show all sequences]

AA954312.1 Clone IMAGE:1563011 mixed 3' read
AA968452.1 Clone IMAGE:1580175 mixed 3' read
AA988135.1 Clone IMAGE:1604653 lung 3' read A
AI028518.1 Clone IMAGE:1649655 parathyroid 3' read
AA922222.1 Clone IMAGE:1543708 mixed 3' read A
AI138335.1 Clone IMAGE:1736320 testis 3' read A
AI167651.1 Clone IMAGE:1682858 parathyroid 3' read
BX116643.1 Clone IMAGp998D06369_;_IMAGE:194261 mixed A
BX103413.1 Clone IMAGp998I09611_;_IMAGE:276944 brain
AI248112.1 Clone IMAGE:1849983 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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