> DDB1 and CUL4 associated factor 16 (DCAF16)
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UGID:2083798     UniGene Hs.614787     Homo sapiens (human)   DCAF16 Order cDNA clone, Links
DDB1 and CUL4 associated factor 16 (DCAF16)

Human protein-coding gene DCAF16. Represented by 215 ESTs from 137 cDNA libraries. Corresponds to reference sequence NM_017741.3. [UniGene 2083798 - Hs.614787]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060211.3 DCAF16 gene product H. sapiens 100.0 215
XP_001118954.2 PREDICTED: DDB1- and CUL4-associated factor 16-like M. mulatta 99.5 215
XP_003898577.1 PREDICTED: DDB1- and CUL4-associated factor 16 isoform 1 P. anubis 99.5 215
Other hits (2 of 5) [Show all]SpeciesId(%)Len(aa)
XP_003364783.1 PREDICTED: DDB1- and CUL4-associated factor 16-like E. caballus 98.6 215
XP_002709415.1 PREDICTED: hypothetical protein O. cuniculus 98.2 215

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; connective tissue; pharynx; mouth; testis; ear; pituitary gland; uncharacterized tissue; embryonic tissue; mammary gland; mixed; bone; kidney; amniotic fluid; muscle; eye; placenta; ovary; vascular; intestine; pancreas; prostate; uterus; lung; liver; thyroid; parathyroid; bladder; blood; spleen; thymus; trachea; skin; salivary gland; lymph; stomach; heart; lymph node; cervix; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p15.31
UniSTS entry: Chr 4 RH102454
UniSTS entry: Chr 4 SHGC-16179 [Map Viewer]
UniSTS entry: Chr 4 RH102048
UniSTS entry: Chr 1 D8S2282
UniSTS entry: CXCL14
UniSTS entry: Chr 1 D10S2448
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC050697.1 Homo sapiens chromosome 4 open reading frame 30, mRNA (cDNA clone MGC:60283 IMAGE:6044417), complete cds PA
BC068025.1 Homo sapiens chromosome 4 open reading frame 30, mRNA (cDNA clone MGC:71947 IMAGE:4593954), complete cds PA
AK000287.1 Homo sapiens cDNA FLJ20280 fis, clone HEP03525 PA
NM_017741.3 Homo sapiens DDB1 and CUL4 associated factor 16 (DCAF16), mRNA P
BC101718.1 Homo sapiens chromosome 4 open reading frame 30, mRNA (cDNA clone MGC:126767 IMAGE:8069224), complete cds P
BC101716.1 Homo sapiens chromosome 4 open reading frame 30, mRNA (cDNA clone MGC:126765 IMAGE:8069222), complete cds P
AK056116.1 Homo sapiens cDNA FLJ31554 fis, clone NT2RI2001230 P
BC014536.1 Homo sapiens chromosome 4 open reading frame 30, mRNA (cDNA clone IMAGE:4291573), with apparent retained intron PA

EST sequences (10 of 215) [Show all sequences]

AA909673.1 Clone IMAGE:1544153 mixed 3' read A
AI031566.1 Clone IMAGE:1650071 parathyroid 3' read
CB069271.1 Clone IMAGE:6364902 pancreas 3' read A
CB069478.1 Clone IMAGE:6364902 pancreas 5' read A
BX117617.1 Clone IMAGp998P22828_;_IMAGE:360453 eye
CB116051.1 Clone L8SCK0-12-G10 liver 5' read
AI299748.1 Clone IMAGE:1897189 lung 3' read
AI299817.1 Clone IMAGE:1895934 lung 3' read
R48753.1 Clone IMAGE:153935 mammary gland 5' read
CB217634.1 Clone IMAGE:5794861 bone 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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